Gene PMN2A_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0116 
SymbolaroB 
ID3605467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand- 
Start bp670935 
End bp672041 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content36% 
IMG OID637686972 
Product3-dehydroquinate synthase 
Protein accessionYP_291311 
Protein GI72381956 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0337] 3-dehydroquinate synthetase 
TIGRFAM ID[TIGR01357] 3-dehydroquinate synthase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATAAAG ACAACCACCA TATTAAAGTC TCTCTAACTA ACAACCCATA CGAAATAGTT 
ATCGGAAAAA GTAGTCTTGA AAGCATAGGA GATGAGCTAT TTAATATTGG TTTTAGGGAA 
GGACTAAAAG TATTAGTCGT TTCCAACAAG GAAGTCTCTG ATCACTATGG TGATTGCATA 
ATCAAAAGTC TGATAAAAAG TAAATTCAAA CCAAAGCTTT TAATAATAAA AGCTGGAGAA 
GATCAAAAAA ATCAATCTTC TATAGATTTA ATCCACAATG CGGCATATGA AGCGAGGTTA 
GAGAGAGGAT CATTAATGAT TGCCCTTGGA GGTGGCGTGA TTGGAGACAT GACTGGCTTT 
GCAGCTGCTA CATGGTTGCG TGGAGTAAAT GTAGTCCAAA TCCCCACCAC GTTACTCGCC 
ATGGTTGATG CTTCTATTGG TGGTAAAACA GGGATAAATC ATTCAAAAGG TAAAAATCTT 
ATAGGTGCTT TTCATCAACC TAGATTGGTC TTAATAGACC CTAAAACATT AATTACTCTC 
CCATCACGAG AGTTCAAAGC AGGTATGGCT GAAATAATAA AGTACGGAGT TATATCAGAC 
TTAGAACTAT TCGAACTTCT AGAAAGGCAA GAAAATATTT CTGATCTTTC AAACATAAAA 
GAAAAACTAC TAATAGAAAT AATTAAGCGT TCTGCTAAAT CTAAAGCAGA AATTGTTATA 
AAAGATGAGA AGGAAAGTGG AGTTAGAGCA TTTTTAAATT ATGGTCACAC ATTTGGCCAC 
GTAATAGAAA ATCTTTGTGG TTATGGGAAA TGGCTGCATG GTGAGGCAGT TGCAATGGGT 
ATGGTTGCAG TTGGTCAGTT AGCGGTTCAG AGGGGACTAT GGAAAGAGGA TAACGCGAAA 
AGGCAGAAAC GATTAATAGA GAAAGCAGGC TTACCTTCTA ATTGGCCTCA GCTTGAGATA 
GAAAGTGTTC TAAGCTCACT TCAAGGAGAC AAGAAAGTTA AGAACGGCAA GGTGAGTTTC 
GTTATGCCCT TAAAAATTGG TGATGTAAAA TTATTTAATA ATATTTCTAA TAAAGAAATA 
CGTGAATGCT TGCAAAAAAT TAGCTAA
 
Protein sequence
MNKDNHHIKV SLTNNPYEIV IGKSSLESIG DELFNIGFRE GLKVLVVSNK EVSDHYGDCI 
IKSLIKSKFK PKLLIIKAGE DQKNQSSIDL IHNAAYEARL ERGSLMIALG GGVIGDMTGF 
AAATWLRGVN VVQIPTTLLA MVDASIGGKT GINHSKGKNL IGAFHQPRLV LIDPKTLITL 
PSREFKAGMA EIIKYGVISD LELFELLERQ ENISDLSNIK EKLLIEIIKR SAKSKAEIVI 
KDEKESGVRA FLNYGHTFGH VIENLCGYGK WLHGEAVAMG MVAVGQLAVQ RGLWKEDNAK 
RQKRLIEKAG LPSNWPQLEI ESVLSSLQGD KKVKNGKVSF VMPLKIGDVK LFNNISNKEI 
RECLQKIS