Gene PMN2A_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0106 
Symbol 
ID3605457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp661547 
End bp662725 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content35% 
IMG OID637686962 
ProductL-aspartate aminotransferase 
Protein accessionYP_291301 
Protein GI72381946 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACA AATCACAGAT ATCTATAAGA GCTCTCTCCA TAAAACCCTC TCTAACTCTT 
GAGATCAGCG CAAAAGCTAA AGCTTTAAAA GCTGAAGGTA AAAATATTTG TAGTTTAAGC
GCAGGGGAAC CTGATTTCGA TACCCCTGAA TTTATTGTCG ATGCAACTCT AAAAGCATTA
AAAGATGGGA AAACTCGTTA CGGGCCTGCA GCTGGAGATC CTGAATTAAG AGAAGCCATT
GCGCAAAAAC AATCAGATAT AAATAAAGTT CCAACAAAAA CAGACAATGT TCTAGTAACT
AATGGAGGGA AACAAGCAAT ATACAATTTA TTTCAAGTAG TTTTGAATCC CGGAGATGAA
GTCCTGATCC CAACTCCTTA TTGGCTTAGT TATCCAGAGA TAACTCTTTT AGCGGGTGCC
AAGCCAATAA AAATTAAATC ATCCACTAAA GATAAATTTA AAATAGATAT CAATTCTCTA
GAAGAACACG TAACCGAAAA AACAAGGTTA TTAATTATTA ACTCTCCAAG TAATCCAACT
GGCTGTGTTT TAACTGAGCA AGAGATGAAA ACTATTTCCG ATTTTTTAAG AAGGCATCCA
AGAATTTTAT TAATGAGTGA TGAAATTTAT GAATTTCTTA TTTCTCCAAA TCAAGTTCAT
CACAGTTTCG CGAAAATCGC ACCAGACCTA AAAAATAGAA TTTTCACCGT CAACGGTTTT
GCCAAGGCGT GGGCAATGAC TGGTTGGAGG ATTGGCTACT TAACAGGAAA CGCCGAGGTA
ATAAAGAAAG CCATTGCTTT ACAAAGTCAA AGTACAAGCA ATGTATGTAG TTTTGCTCAA
AAAGGGGCTA TTGCAGCACT TCAAGGCTCA AAAGATTGCG TTCATGAAAT GGCAAATATT
TATAACAAAA GGAGGTTATT AATAACAGAA AGACTAAAAA AAATAAAACA TATTTCTTTT
GTCCCTCCCA ATGGAGCTTT CTATGTTTTC CCAGAAATTA ATCTAGAGGA GATCGATTCA
ATAAGTTTCT GCAAATTGGC ACTAGAAAAG GTCGGTCTAG CAATAGTTCC AGGGATTGCT
TTTGGAGATG ACAAATGTAT AAGAATCTCA TACGCAGCTT CAAATAAAAT GATCGAAGAT
GGAGTTAATA GGCTAGAAAG ACTATTAAAT GATTTTTAA
 
Protein sequence
MTDKSQISIR ALSIKPSLTL EISAKAKALK AEGKNICSLS AGEPDFDTPE FIVDATLKAL 
KDGKTRYGPA AGDPELREAI AQKQSDINKV PTKTDNVLVT NGGKQAIYNL FQVVLNPGDE
VLIPTPYWLS YPEITLLAGA KPIKIKSSTK DKFKIDINSL EEHVTEKTRL LIINSPSNPT
GCVLTEQEMK TISDFLRRHP RILLMSDEIY EFLISPNQVH HSFAKIAPDL KNRIFTVNGF
AKAWAMTGWR IGYLTGNAEV IKKAIALQSQ STSNVCSFAQ KGAIAALQGS KDCVHEMANI
YNKRRLLITE RLKKIKHISF VPPNGAFYVF PEINLEEIDS ISFCKLALEK VGLAIVPGIA
FGDDKCIRIS YAASNKMIED GVNRLERLLN DF