Gene PMN2A_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0093 
Symbol 
ID3605444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp648391 
End bp650727 
Gene Length2337 bp 
Protein Length778 aa 
Translation table11 
GC content40% 
IMG OID637686949 
Productribonucleotide reductase (class II) 
Protein accessionYP_291288 
Protein GI72381933 
COG category 
COG ID 
TIGRFAM ID[TIGR02505] ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.126757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACAATTG CAACTAGTCA GCCCGAAACC AATAATTCAG CATCGGGTAA AGAAAATGAT 
ACGACTGATT TTCCAATAAC TGCACCTGCA GCCAATCCTG TCTTTTACAG AACTTATAGT
AGGAAACTTC CAGCTGGTCG TGAAAGCTGG GAACAAGTAA ATGCTAGAAA CCTAGATGGT
CTAAAGAAGC TTGGGGGACT AAACGAAGCA GAAATAAATT TAATGCAAAG AATGCAACAA
GAAAAAAAAG CTCTTCCATC AGGTCGATGG CTTTGGATAG GGGGAACAGA ATGGATTGAA
AAAGAGAAGA ATTTTTCTGG AGCCTACAAT TGCACCTCAA CGAATCTTGT TGATTGGCAA
GCCTTTGGAC TTATGATGGA TTTAGCCATG ATGGGTTGCG GAACAGGGGC GATAATTGAA
CCACACTTAA TTGATCAACT GCCAGAAGTT AGAAATACAA TTCACATTGC AAATGTTACA
GAAATTGGAT TAACCCCTTC TGAAGAAAGA AATGAAAAAA CTACATTTTC TATTAAAGAT
AATAATGTAC TCATAAAAGT TGGGGATAGT AGACGTGGAT GGGTTGATAG CTATCAAAAA
ATCCTTGAAT TAAGCAGTGA CAATAGCTTC AATTCTAAAG TTGTTAATGT ATCTATTGAT
TTAAAAGATG TAAGGCCAGC GGGTGAATCA CTCAAAGGTT TCGGAGGCAT GGCGAACCCT
GTAAAACTCA AAGATTTATA CCCGCGCGTA GCAACTCTTC TAAACAAAGC AGTAGGAAGA
AAACTAACTT CAATTGAATG TTGTCTGCTT ATCGACGAAG CAGCCGTAAC AATCGTTGCT
GGCAACATCA GAAGGAGTGC AGGTATGCGC CAATTTTCTT CGCAAGATTT AGAAGCAGCT
GGTGCTAAAG AAAATTTATG GAAGCAAGAC TCAGAGGGGA ATTGGAGTAT TGACCCAGAG
AAGGATGCAT TAAGAATGGC TAACCATACT CGTGTTTACC ACACCAAACC TGAGTTAAAA
GTTCTTGTCG ATGCGGTTAT TAAACAATTT CATTCAGGAG AGGGAGCTAT TCAATTTGCA
CCAGAGGCAA TTGCTCGCTC AAATGCTGAC ATACTTTCAA CAGTAGAACT CAGGAATGAA
TTTATAGAGA TCTATTGTGA CCAAGGTAAA GAAGAAGCTT CCAAATGGAT TCAATCAAAT
TATGGTCCAT TTGATGATAA AGAGCTTTTT CACAGACTCA GTAGATATGG TCTAAATCCT
TGCGGAGAAA TTCTAGGTTC AGATTTTCAC TGTAATCTTG CAGAAATCCA TCTTAATCAA
ATTGATCCAT TAGACATAAA TCAACAAGAG GATGCTTTCA AAGCAGCCGC TTTGTCAGTA
GCCTGTCTCC TTAATCATCG ATTCGAAGTA GAGCGGTACA GAAAAAGTCG CGAATGGGAT
CCCATTGTTG GGGTTAGCTT CACAGGACTT TTTGACTTTT TTGTTCATGC CTTTGGGACT
CCATGGCTAA AATGGTGGGA GGCGGGACGA CCTGAGACAA AAGAAGGAAA TGATTTCAAA
CTCAAAGAAG CTACTTTTTT GAGTCGATGG AGGAAGATCG TCAACGATAC AGTTTGGGAG
TATTGTGATA GACATAATAT TCGCCGTCCA AGTCGTTGTA CAACAGTTCA ACCTGCGGGT
ACAAAAAGTC TTCTAACAGG GGCTTCGCCA GGTTGGCATC CTCCAAAAGC TCAGCGTTTT
ATCAGAAGGA TTACGTTTAG GAAGAACGAT CCAGTCGCAT TAGCTTGCAT GGATTATGGA
TACACAATCG TCCCTTCTCA GTCAGATAAA GATGAAAATG GAAAACTACT AGACAATCCA
TTTGATCCAA AATGTACTGA GTGGCTAGTT GAAATACCTA CTGAGGTAAG TTGGGCAAAC
ATTCCTGGTG CGGATGAAAT AGATATCAAT AACTTCTCAG CTCTTGCACA ATTTGATTTT
TATATGCAAG TTCAAACAAA CTATACAGAC CACAACACCT CTGCCACTAT TGAATTCAGA
GAAAATGAGA TAGAGGGTTT AGCTAAAGCT CTTTATAGCT CAATCAGTGA AAATAAAGGT
TATATTTCAG CGGCATTGCT AGCCAGGTTT GATGCAAATG CAACCTTCCC CAGACTTCCT
TTTGAACCTA TTGATGAAGA ATGCTACACA AAAATGCAAT CAGAGGTCAT AAAAAGAAGA
GACACTTGTG ATTTCTTTGA AGCTCTTAGT CGATATGATC AAGGGGAGCT TACTGAAGCA
GGTCCAGCAG GTTGCGATTC TGATAAATGC TTACTTCCAC TGGCCAAACC GTCTTAA
 
Protein sequence
MTIATSQPET NNSASGKEND TTDFPITAPA ANPVFYRTYS RKLPAGRESW EQVNARNLDG 
LKKLGGLNEA EINLMQRMQQ EKKALPSGRW LWIGGTEWIE KEKNFSGAYN CTSTNLVDWQ
AFGLMMDLAM MGCGTGAIIE PHLIDQLPEV RNTIHIANVT EIGLTPSEER NEKTTFSIKD
NNVLIKVGDS RRGWVDSYQK ILELSSDNSF NSKVVNVSID LKDVRPAGES LKGFGGMANP
VKLKDLYPRV ATLLNKAVGR KLTSIECCLL IDEAAVTIVA GNIRRSAGMR QFSSQDLEAA
GAKENLWKQD SEGNWSIDPE KDALRMANHT RVYHTKPELK VLVDAVIKQF HSGEGAIQFA
PEAIARSNAD ILSTVELRNE FIEIYCDQGK EEASKWIQSN YGPFDDKELF HRLSRYGLNP
CGEILGSDFH CNLAEIHLNQ IDPLDINQQE DAFKAAALSV ACLLNHRFEV ERYRKSREWD
PIVGVSFTGL FDFFVHAFGT PWLKWWEAGR PETKEGNDFK LKEATFLSRW RKIVNDTVWE
YCDRHNIRRP SRCTTVQPAG TKSLLTGASP GWHPPKAQRF IRRITFRKND PVALACMDYG
YTIVPSQSDK DENGKLLDNP FDPKCTEWLV EIPTEVSWAN IPGADEIDIN NFSALAQFDF
YMQVQTNYTD HNTSATIEFR ENEIEGLAKA LYSSISENKG YISAALLARF DANATFPRLP
FEPIDEECYT KMQSEVIKRR DTCDFFEALS RYDQGELTEA GPAGCDSDKC LLPLAKPS