| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_0090 |
|---|
| Symbol | |
|---|
| ID | 3605440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | + |
|---|
| Start bp | 644795 |
|---|
| End bp | 646891 |
|---|
| Gene Length | 2097 bp |
|---|
| Protein Length | 698 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637686945 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_291285 |
|---|
| Protein GI | 72381930 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTATTA AGAAAAATAT TAATCACTCT AAATATATTT TTTGGATTTC AATTTTATGT
ATATGGATTC TTTCGACCAT AATTGATCGT ATTTGGTGGA ATTTATATAG CATTACTCCT
TCATGGGATC AGGCTGACTA TCTCAATAGT GCTATTGACC ATGCCCGTGC ACTCTCTTTT
TTGGGAGCAG ATGGAGCTTC AGACTTTAAT TCTTTACTAG ATAAATCGCC AAAAATTCCT
CCTTTGGCTT CAATAATCAA TGGAGCCGTA ATTGCCTTTG CTGGTGATGC TCCTCATCAG
GCGGCCTGGT CCTTAAGTTT TTGGAATGGA TTCTTTATCT TTAATATTGC TTCGTGGGGA
CTTTATTTGA GTGGGAAAAA ACTTGGACTT TTTTGTGTTC TTATTAGTGC ATGTTCTCCT
TTCTTATTTA ATCTAAGAAC TGATTATTTA TTGGAGTTAC CTTTAATTTC CGCTATTACA
TTTTATTTAT TTCATCTAGG AAGGTGGAGT GATAAATCAA TCGGAGGTAA ATGGATTCAA
TTGATAATTG CTACTTTCGC ATGCTCTTTT TCTTTATTGA TTAAGCAAAG TTCTTTATTA
GTTATCATAC CTTCCTTATT ATTTGTCTTT GTGCTTTCTT TTAAAAGAGA TAAAAAATTT
CGATTACAAT TTTTATGCTT AGTTCTTATC AATATTTTAG CAATTTTACC TTGGTTTTTT
CACAATTGGA TAATGATATT AAGTGGAACT TATAGAGCTG TTTTTGAATC GGCGGCGATA
GAAGGTGATC CTTCTATTTT AGGTTTTAAA AGTATTTTCT GGTATTTCCC ATATTTAGAT
AATCAGTTTG GAAGTATTAT TTTCTTTTTT GGATTGTCAG GAATACTATT TGCATTTTTA
ACCTATGTAA GATCTTTTAG ATCTCAAGCA AGATTAGTCG ATATTTTTAA TGAGAATAAT
TATAAATGGA CATGGATTTA TTTTAATTTA ATAACATGCT GGACTTTTAC AACTTTCATT
CCTAACAAGG ATGAAAGATA TATAGCATGT ACAATCCCGT TAATTATTTT ACTGCTAGGC
TTTGGATTTA CTAAGTGGAG TGATTGGCTA GATACTTATT TTAAATTAAA CTCTTATATT
TTATTATTTA TTCCTGCTGT CAGTTTTCTA TTTTCCAATT CTATTAATAA GTTTAACACT
TTACAAAATA TTGCAAGTAA ATATTATCCT GTTAAAGATA TTTTATCGAT AGTTAGATCT
GATCAGACTA TCGATAAAAA AGAAACAGTT ATTGTTGTTC CAAGCACCCC TGAAATTAAT
CAGCATAATG TAAGCTATTT TGGAAGAATG CAAGGTGGAA ATATTTTAGG CAGACAACTT
GGGCAATCTC TTTTGCATAT AGAACCAGTG CTTAAATACT CTAATTGGAT TATTTTGGCA
GACGGAGATC AAGGCTCAGT TCCAAGTAAT TCACTAGTTC TAGACAAAGC GATTAGAGAT
AGTTCTCTTT TTATACAAGT TCAAGAATTT CCTAGAGAAA AAGAAGGAAG CTATACTCTT
TGGAAGCGAA GATCAAGTTC ATTTAATCCA AATGAATTTC ATAATAGATT TATTGAACTA
GCAAAGGGGA TGGAGAAAGG TCCATTAGGT ATTAAATTGA TTTTTGATGA AATAGAAATA
GAACATATGC TTGATGGGCA TTTAAAATAT CAAAGTATAG TTAGAGATAA GGCATTATCC
AAAATAAGTT CAGACCCTGA AAATGTTGAA TCTTTATGGT CCTTATCGCT TTTGAAGATA
TTATCGAATA GACCTTATGA AGCTGATATT TATTTAAGAA ATTTAGAAAT CTTGTTGCCA
AATAATCCTT GGCCAAGTGC TTATAGAATA ATAGTTAACT TTGCCTCTTG GAATCCTTGG
AAGGCCTCAT TAATAGCCGA TAAAGCTAAT AAAAGAAATC CAAATTACTT TCTAAAAAGT
TTGAGTGATA TAAGTGCAAT TTTTAGGGGA TCCTTTTGGC GATTAAAGTC TGCTTTAAAT
AGTGTTCCGA ATGCAATAAA AAGTGTTGAT GAATCTCTAA AACCAATAGA AAAATAG
|
|---|
| Protein sequence | MLIKKNINHS KYIFWISILC IWILSTIIDR IWWNLYSITP SWDQADYLNS AIDHARALSF
LGADGASDFN SLLDKSPKIP PLASIINGAV IAFAGDAPHQ AAWSLSFWNG FFIFNIASWG
LYLSGKKLGL FCVLISACSP FLFNLRTDYL LELPLISAIT FYLFHLGRWS DKSIGGKWIQ
LIIATFACSF SLLIKQSSLL VIIPSLLFVF VLSFKRDKKF RLQFLCLVLI NILAILPWFF
HNWIMILSGT YRAVFESAAI EGDPSILGFK SIFWYFPYLD NQFGSIIFFF GLSGILFAFL
TYVRSFRSQA RLVDIFNENN YKWTWIYFNL ITCWTFTTFI PNKDERYIAC TIPLIILLLG
FGFTKWSDWL DTYFKLNSYI LLFIPAVSFL FSNSINKFNT LQNIASKYYP VKDILSIVRS
DQTIDKKETV IVVPSTPEIN QHNVSYFGRM QGGNILGRQL GQSLLHIEPV LKYSNWIILA
DGDQGSVPSN SLVLDKAIRD SSLFIQVQEF PREKEGSYTL WKRRSSSFNP NEFHNRFIEL
AKGMEKGPLG IKLIFDEIEI EHMLDGHLKY QSIVRDKALS KISSDPENVE SLWSLSLLKI
LSNRPYEADI YLRNLEILLP NNPWPSAYRI IVNFASWNPW KASLIADKAN KRNPNYFLKS
LSDISAIFRG SFWRLKSALN SVPNAIKSVD ESLKPIEK
|
|---|
| |