Gene PMN2A_0074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0074 
Symbol 
ID3605481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp627780 
End bp628802 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content29% 
IMG OID637686929 
Productputative light-dependent protochlorophyllide oxido-reductase 
Protein accessionYP_291269 
Protein GI72381914 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.120468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAA AATCAAATAT TTTCAATAGA GATAAACCTT TAACTGTAAT GATAACAGGT 
GGTTCATCGG GTATTGGTTT TCAAGCAGTT TTAAAATTAA TTTCCCTTGG TCATAATATA
ATTTTACCTT GTAAAAATAT ATCTCGAGCG AATGAGGTGT TGACTAATTT ATTTAATCAT
TCTTTAGATG AATCATCTAA CAAAGGGGAA ATTTATACTC CAATAATGGA TCTTTCTGAT
TTGAGTAGTA TTGATTCTTT ATGTTCTGAG GTTAAAAATA GACGTTGGAC TATTGATGTT
TTAATTTTGA ATGCTGGTCT TCAATATACA GGATCAAAAA CACCTAGAAG GTCCACTCAA
GGAATAGAAT TAACTTTTGC CGTTAACCAT TTATCACATT TCTATCTGAC ACAAAAGATT
TTACCTTTTA TAGATATAAG AAATGATCCA AAAATAATTA TTACTTCTTC AGAAGTTCAT
AATCCTAATA GTGGTGGAGG AAAAGTGGGA GCTAAGGCAA GCTTAGGAAA ATTAAAAGGA
TTAATATCTG GTGCCGGTTT TGAAATGATT GATGGAAATA AATTTAATGC TGATAAAGCA
TATAAAGATA GTAAATTATG TAATATTCTT TTTGCAAGAA AGTTAAGTGA TAATTTTATG
AAAAAGAAAT TATCAATTCC AGTTATAGCA TGGGCACCAG GCTTGGTTAT CTCTAGAGAT
AACCAAGGAT TTTTTAGGTA CAGCAGGAAA TACAATCAAT TAGGACAAAT ATTATTTGCC
TTTTTAGCTA GAGATATTCT AAAAATAACC ACATCAAATA AAAAAGCAGG CTTACTTTTA
AGCAATCTAG CTTGTTTAAG TAAATATACA AAACCTGGTT TCAACTATTA TAGTAATAAA
ATTATTTCAT CTGGTAAATT CATTTTTGAT GAAACCGAAA TAAGTAATGA TGCCCAAAGA
GGAGATTTAT CAGATAATTT ATGGGAGTTA TCTAAATCTC TAATAGATAA GATAAATAAA
TAA
 
Protein sequence
MKEKSNIFNR DKPLTVMITG GSSGIGFQAV LKLISLGHNI ILPCKNISRA NEVLTNLFNH 
SLDESSNKGE IYTPIMDLSD LSSIDSLCSE VKNRRWTIDV LILNAGLQYT GSKTPRRSTQ
GIELTFAVNH LSHFYLTQKI LPFIDIRNDP KIIITSSEVH NPNSGGGKVG AKASLGKLKG
LISGAGFEMI DGNKFNADKA YKDSKLCNIL FARKLSDNFM KKKLSIPVIA WAPGLVISRD
NQGFFRYSRK YNQLGQILFA FLARDILKIT TSNKKAGLLL SNLACLSKYT KPGFNYYSNK
IISSGKFIFD ETEISNDAQR GDLSDNLWEL SKSLIDKINK