| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_0072 |
|---|
| Symbol | |
|---|
| ID | 3605479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | - |
|---|
| Start bp | 625471 |
|---|
| End bp | 626184 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 637686927 |
|---|
| Product | short-chain dehydrogenase/reductase |
|---|
| Protein accession | YP_291267 |
|---|
| Protein GI | 72381912 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAA TCCTTATAAG TGGAGCAAGT AGAGGTATAG GAAAAGCGAT AGCAATAAAA
TTACTTAAAG AAGGACATTA TTTAAGCTTA GGAGTAAGAG AAAGAGACGA TTTATTTAAT
ACACCATTAG ATCCAAAAAT AAACAATTCA GATAGTTTCT TGGTTCACAC CTATGATGCA
ACTGATCAAA ACTCATCAAA GAAATGGGTA GAAAAAACAT TTGAAACTTT TAAAAGTGTT
GATACTATTA TTCATTGTGC TGGAATATTC AAAAGAACAA AACTATTATT TAATGATAAT
GAAATGAAAG ATATTGAAGA TCTATGGAAA GTTAATGTGA TGGGGCCATG GATACTAACA
AAACATGCTT GGAAGTATTT ATCTCTAAGC AATTCAGCAC GAATTATTGT ATTAGTATCA
ATGAGTGGAA AACGATCAAA AGGTAACTTG TGTGGCTATT CTATGAGTAA ATTTGCTTTA
ATGAGCTTAT GCCAAACAAT GAGAAATGAA GGATGGGGAA ACGGTATTAG AGTTACAGCT
ATTTGCCCAG GCTGGGTAAA TACAGACATG GCAAAAGAAA TAAAACATTA TCCCAAAAAA
GATATGTCAC AAGCAAAGGA TATTGCAAGT ATTTGCTCCA ATTTACTTAC TTTACCAAAC
AGTTCTATTC CTTTTGAAAT CTCACTAAAT TGTCAACTTG AAACAAACAT TTAG
|
|---|
| Protein sequence | MRKILISGAS RGIGKAIAIK LLKEGHYLSL GVRERDDLFN TPLDPKINNS DSFLVHTYDA
TDQNSSKKWV EKTFETFKSV DTIIHCAGIF KRTKLLFNDN EMKDIEDLWK VNVMGPWILT
KHAWKYLSLS NSARIIVLVS MSGKRSKGNL CGYSMSKFAL MSLCQTMRNE GWGNGIRVTA
ICPGWVNTDM AKEIKHYPKK DMSQAKDIAS ICSNLLTLPN SSIPFEISLN CQLETNI
|
|---|
| |