Gene PMN2A_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0062 
Symbol 
ID3605431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp617562 
End bp618965 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content36% 
IMG OID637686917 
ProductUDP-glucose 6-dehydrogenase 
Protein accessionYP_291257 
Protein GI72381902 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTCCA TTAAAATCCA GAAAATATGT TGTATTGGCG CTGGTTATGT AGGTGGTCCA 
ACCATGTCTG TTATTGCAGA TAAATGTCCT GATTTAGAAA TTAGGGTTGT TGATATCAAT
AAAGAACGAA TTGATGCATG GAATGATTCA GATCTCAATA AATTGCCAAT ATTTGAACCT
GGACTAGATC GGATAATTTC AAGAACAAGA GGGCGGAACC TTTTCTTCAG CACAGAAATG
GAAAAGTCGA TATCTGATGC TGATATGATT TTTATATCAG TCAATACTCC CACCAAAACA
AAAGGTCTTG GAGCAGGACA AGCAAGTGAT CTTAGTTGGG TTGAAGCTAG TGCAAGGCAA
GTAGCTAAAT ACGCAAAAGG ACACACGATA GTAATTGAAA AAAGTACTCT TCCAGTTCGT
ACTGCACAGG CAATAAAAGA GATACTTAAG ACAACAGATA AAGAGATGCA AAAAAATGAA
ATTTCAAAAA CTTTTTCTGT TTTATCGAAT CCTGAATTTT TGGCTGAAGG CACCGCAATT
AATGACTTAG AAAAACCTGA TAGGGTTTTA ATTGGTGGAG AGGATTCTGA CTCTATAGAT
GCATTGGTTA AGATTTATTT GAACTGGGTT CCTTATGAGC AAATAATTTG TACTAATCTT
TGGAGTAGCG AACTTTCAAA ATTAGCTGCT AATGCATTCC TAGCTCAGAG AATTAGTTCC
ATCAATTCTA TTTCAGCCTT TTGTGAGGCT ACTGGAGCTG ATGTTCAGGA AGTTGCTAAA
GCAATAGGAA CAGATAAAAG AATAGGTAAT CAATTTCTTA GTGCAGGACC TGGGTTTGGT
GGGAGCTGCT TTAAAAAGGA TATTTTGAAT TTAGTTTATT TGAGTGGATA TTTTGGATTA
CCAGAGGTTG CTAATTACTG GAATCAAGTT GTCGTGCTCA ATACTTGGCA ACAAGATAGA
ATTTATAAAA TTGTCCTAGA GAAGCTTTTT GGTACAGTTA ATGGAAAAAA TATAGCAATA
CTCGGTTTTT CTTTTAAGGC AAACACCAAC GATACCCGAG AATCACCTGC GATAAGAATT
TCCAGTGACT TACTCGAAGA AGGAGCAATT TTATCAATTT ATGACCCTAA GGTTACATTT
GAGAGAATAG AAGAAGATTT TGAAAAATTT TCATTTAATA ATCAAGGAAT TTGGAAAATG
GCCAGTTCTA TTCCAGAAGC ATTGAAAAAT GTTGATGCAG TTATAATTCT CACTGCATGG
GATGAATTCT TTGGACTTGA TTGGAATTAT TTAGCTTCTT TAATGAGATC ACCAGCTTGG
GTCTTTGATA CAAGATCTGT TGTTAATCGA CAAGAAGTTG AAGATACAGG TGTAAATCTT
TGGAAGCTGG GTGAGGGGAA CTAA
 
Protein sequence
MSSIKIQKIC CIGAGYVGGP TMSVIADKCP DLEIRVVDIN KERIDAWNDS DLNKLPIFEP 
GLDRIISRTR GRNLFFSTEM EKSISDADMI FISVNTPTKT KGLGAGQASD LSWVEASARQ
VAKYAKGHTI VIEKSTLPVR TAQAIKEILK TTDKEMQKNE ISKTFSVLSN PEFLAEGTAI
NDLEKPDRVL IGGEDSDSID ALVKIYLNWV PYEQIICTNL WSSELSKLAA NAFLAQRISS
INSISAFCEA TGADVQEVAK AIGTDKRIGN QFLSAGPGFG GSCFKKDILN LVYLSGYFGL
PEVANYWNQV VVLNTWQQDR IYKIVLEKLF GTVNGKNIAI LGFSFKANTN DTRESPAIRI
SSDLLEEGAI LSIYDPKVTF ERIEEDFEKF SFNNQGIWKM ASSIPEALKN VDAVIILTAW
DEFFGLDWNY LASLMRSPAW VFDTRSVVNR QEVEDTGVNL WKLGEGN