Gene PMN2A_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0042 
Symbol 
ID3605411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp595226 
End bp595792 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content35% 
IMG OID637686897 
Productleader peptidase I 
Protein accessionYP_291237 
Protein GI72381882 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.643112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCTA CTGGATCAAA AAAGAATCAA AACCAAAATA GCTGGAAAGG ATTGTTGGTT 
TGGATATTAA TTGCGCTTTT ATTAAGATGG CAAGCAGTTG AACCTAGATG GATTCCATCT
GGATCAATGA TTCCAACTTT GCAAATTCAA GACAGAATAT TGATAGAAAA AATAACCCCA
AGACTTAATA ATAAACTAAA TAAACATTTA AATTTAAACA CGATTGTTAT TTTCAAACCT
CCCAAAATTC TTACAGAAGC AGGTTACAGT GATGGTTCAG CGCTAATTAA AAGAGTCGTT
GGCTTACCTG GAGACAAAAT AGAAGTAACT GATGGGAAAC TATATAGAAA TGGAAAAGAA
ATAAATGAAC CTTGGATTAA AGAACCTATC CAATATGAAA TGGACGCAAT AAATGTACCT
GAATATTCAC TTTGGGTCTT AGGAGACAAC CGAAATAACA GTTTAGACTC TCATATCTGG
GGAGCTCTCC CAGAAAAAAA TCTTATAGGT ACGGCGCTTG CAAGGTACTG GCCATTAAAA
AAAATAGGGC CTATTCGGTT CCCATAA
 
Protein sequence
MTSTGSKKNQ NQNSWKGLLV WILIALLLRW QAVEPRWIPS GSMIPTLQIQ DRILIEKITP 
RLNNKLNKHL NLNTIVIFKP PKILTEAGYS DGSALIKRVV GLPGDKIEVT DGKLYRNGKE
INEPWIKEPI QYEMDAINVP EYSLWVLGDN RNNSLDSHIW GALPEKNLIG TALARYWPLK
KIGPIRFP