Gene PMN2A_0033 details

Gene Information

• Locus tag: PMN2A_0033
• Symbol: thrS
• ID: 3605402
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. NATL2A
• Kingdom: Bacteria
• Replicon accession: NC_007335
• Strand: -
• Start bp: 585866
• End bp: 587791
• Gene Length: 1926 bp
• Protein Length: 641 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637686888
• Product: threonyl-tRNA synthetase
• Protein accession: YP_291228
• Protein GI: 72381873
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.611945
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAATAA TTACATTACC TGATGGAACT GAAAAAAAAT ATGATTCCGC TGTAACAATT 
GATCAAATAG CTTCAGAAAT TGGGCCTGGT TTAGCAAAAG CAGCGTTAGC GGGGAGAGTG 
AATGGGGAAT TAATAGATAC TTGTATTCCT ATAACTCAAA ATTCTCATAT ACAGATTATT 
ACATCTAAAG ATGATGAAGG TCTAGAAATT ATTAGACATT CATTCGCTCA TCTTCTTGGA 
CATGCTGTAA AGCAATTATA CCCCGAAGCA AAAATGGCAA TAGGGCCAGT AATTGAAGAT 
GGTTTTTATT ATGATATTTC TTATAAAGAT ACATTCACTC CTGATGATCT TCTCAAAATT 
GAGAAGAGAA TGAAAGAGTT AGTTAATAGA GATTATAGTG TAGGTGTTGA AATAGTTAGT 
CCAGAAAAAG CCAAGGAGGT TTTTACTGAT AGAGGTGAAA TTTTCAAGCT AGACATAGTT 
AAAAATATCC CTAAAAATGA AATCATAAAG TTATACAAAC ATCAAGAATA TATTGATATG 
TGCAGAGGTC CTCATGTGCC AAATACAAGG CATCTAAGAG CATTTAAGCT AATGAAAGTA 
TCAGGAGCTT ATTGGCGCGG AGACTCTAAT AATGAAATGC TACAAAGAAT ATATGGAACA 
GCTTGGAAAA GCTCAAAAGA GTTAAAAGAA TATCTCTCTA GAATTGAAGA AGCTGAGAAA 
AGAGATCATA GAAAGTTAGG GAAAAAATAT TCACTTTTTC ACTCACAAGA AGAAGCACCC 
GGTATGGTTT TTTGGCACCC TAAAGGGTGG ACTATTTATA GAATTTTAGA AGATTTTATT 
CGGGAAACCA TTACAAAATA TGATTATCAA GAAGTTAAAT CTCCGCAAGT AGTTGATAGG 
AGTCTTTGGG AGAAATCAGG CCATTGGGAT AAATTTAAAG AAGATATGTT TACTACAACT 
TCAGAGAACA GGGAATATGC AATAAAACCT ATGAATTGTC CATGCCACAT ACAAATATTC 
AATCAAGGTT TAAAAAGCTA TCGAGATCTT CCTATTAGAC TTTCTGAATT TGGTTCTTGT 
CATCGCAATG AGCCTTCTGG TGCACTGCAT GGCTTAATGA GAGTAAGAAA TTTTGTTCAA 
GATGATGCAC ACATATTTTG TACCGATGAA CAAATCCAAG AAGAAGTCCA AAATTTTATT 
GATTTGGTAT TTGAGGTTTA TAAAACCTTT GGCTTTGATT CAATTCTTAT TAAGCTCTCA 
ACAAGACCAG TGAAAAGGGT TGGAAGTGAT GATATCTGGG ACAAATCAGA AAAAGCCTTA 
TCTGAGGCAC TTGATTCAAA AGGATTAGAT TGGTCGCTCC TCCCTGGAGA GGGTGCCTTC 
TATGGTCCAA AAATAGAATT TTCCTTAAAA GATTGTCTCA ACAGAGTATG GCAATGCGGA 
ACAATTCAAG TGGATTTCTC CATGCCTCAA AGGCTCAATG CAAGTTATAT AGATATTACA 
GGAAGAAAAC AAACACCTGT AATGCTTCAC AGAGCTATTT TAGGTTCTTT TGAAAGATTT 
ATTGGGATTT TAATTGAGAA TTATTCAGGG AATTTTCCTA CATGGTTATC ACCTATTCAA 
ATAATGATTA TGGGCATAAC TGATAGAAAT AATGAAGCAT GTTTTACTGC TAAAGATAAA 
TTAGTTGACT TTGGTTTCAG AGCTGAAATT GATATCAGAA ATGAAAAAGT CGGTTTTAAA 
ATACGAGAAC ATACTATGCA AAGAATACCA TTCTTGATAA TTATTGGAGA TAAGGAAGAA 
GAGAATAGTG AAATCTCAGT AAGGACAAGA GAAGGTAAAG ATCTTGGAAA TATGAGTATA 
GACAAGTTTA AATTAATAAT TGACGAATCA ATTAGCAAAA AAGGTATACA AGGTAATCAA 
TCTTAA 

 

Protein sequence

MPIITLPDGT EKKYDSAVTI DQIASEIGPG LAKAALAGRV NGELIDTCIP ITQNSHIQII 
TSKDDEGLEI IRHSFAHLLG HAVKQLYPEA KMAIGPVIED GFYYDISYKD TFTPDDLLKI 
EKRMKELVNR DYSVGVEIVS PEKAKEVFTD RGEIFKLDIV KNIPKNEIIK LYKHQEYIDM 
CRGPHVPNTR HLRAFKLMKV SGAYWRGDSN NEMLQRIYGT AWKSSKELKE YLSRIEEAEK 
RDHRKLGKKY SLFHSQEEAP GMVFWHPKGW TIYRILEDFI RETITKYDYQ EVKSPQVVDR 
SLWEKSGHWD KFKEDMFTTT SENREYAIKP MNCPCHIQIF NQGLKSYRDL PIRLSEFGSC 
HRNEPSGALH GLMRVRNFVQ DDAHIFCTDE QIQEEVQNFI DLVFEVYKTF GFDSILIKLS 
TRPVKRVGSD DIWDKSEKAL SEALDSKGLD WSLLPGEGAF YGPKIEFSLK DCLNRVWQCG 
TIQVDFSMPQ RLNASYIDIT GRKQTPVMLH RAILGSFERF IGILIENYSG NFPTWLSPIQ 
IMIMGITDRN NEACFTAKDK LVDFGFRAEI DIRNEKVGFK IREHTMQRIP FLIIIGDKEE 
ENSEISVRTR EGKDLGNMSI DKFKLIIDES ISKKGIQGNQ S