Gene PMN2A_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0018 
Symbol 
ID3605382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp566249 
End bp567235 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content35% 
IMG OID637686873 
Producthypothetical protein 
Protein accessionYP_291213 
Protein GI72381858 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAACG AAATAATTCT GATTACTGGA GCAAGTGGAT GTGTTGGGCA ATACATAGCA 
AATTGGCTAA TCGAAAACTC AACTTCAGAA TTATTTTTAT GGGTTAGAGA TCCTAAAAAA
ATAACTTCAA TAAATTTAGA AAACCCAAGG ATTAAAATTT TAGTCGGAGA TTTGAGAGAA
TCAAATAAGT TCAAGAAAGA AATTTCAGAA GTCAACAGAG TTATTCATAC TGCGACTGCT
TGGGGTGATC CTAAAAGGGC GAAAGAAGTC AATATTGATG CAGTAAAAAA TTTGCTCAAT
TTACTAAATC CCTCCAATAT CAAACAAATT ATTTATTTCT CAACTGCAAG TGTTCTTGAC
AGAAACTTAA ATTTGTTACC GGAAGCTTTT ACCTATGGAA CAGAGTACAT ACAAACAAAA
GCACAATGCC TCAGAGAGCT TGAATCTCAT CAGCTTGCAA CGAAGATCAT AGCTGTTTTC
CCAACACTAG TTTTTGGCGG ACGTTTAGAC GGTAAAAGTA AATTTCCAAC TAGTTATCTT
ACCGAAGGGC TTAGAGATGC ATTGAGATGG ATCTGGCTGG CTAGATGGAT AAAATTATCC
TCAAGGTTTC ATTTTATTCA CGCAGCAGAT ATCGCTTTCA TTTGCGGGCA TCTAGCTAAC
TCTGATTTCG AGCCTGTACA ACCTTTTTCT GCCACTAAAA TAAAAAAATT AGTTTTAGGG
CAACCCTATA CAAGTATTGA TGTAGTAATT CAGACGCTTC TAATATGGAA AGGAATGAGA
AGAGTCCCTC AAATCCCTAT TTTGCCTTGG CTTATTGAAC TTATAACTAT ATTACTACCA
ATTCAAATGA CAAATTGGGA TAGATTTAGT CTTAGACAAA AACACTTTAT ACATGAGCCC
GTAACCTCTC CTGAAACCTT CGGGGGTATA AGTCATGCCA AAACGCTAAG TCAAGTTTTA
CATAATTCTG GTTTAACTAA ACACTAA
 
Protein sequence
MKNEIILITG ASGCVGQYIA NWLIENSTSE LFLWVRDPKK ITSINLENPR IKILVGDLRE 
SNKFKKEISE VNRVIHTATA WGDPKRAKEV NIDAVKNLLN LLNPSNIKQI IYFSTASVLD
RNLNLLPEAF TYGTEYIQTK AQCLRELESH QLATKIIAVF PTLVFGGRLD GKSKFPTSYL
TEGLRDALRW IWLARWIKLS SRFHFIHAAD IAFICGHLAN SDFEPVQPFS ATKIKKLVLG
QPYTSIDVVI QTLLIWKGMR RVPQIPILPW LIELITILLP IQMTNWDRFS LRQKHFIHEP
VTSPETFGGI SHAKTLSQVL HNSGLTKH