| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_0013 |
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| Symbol | |
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| ID | 3605377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL2A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007335 |
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| Strand | - |
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| Start bp | 560239 |
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| End bp | 561162 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637686868 |
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| Product | putative type II alternative sigma factor, sigma70 family |
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| Protein accession | YP_291208 |
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| Protein GI | 72381853 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTTCTT TAAGCGACTT TCTTGGAGAA ATAGGAAGAC ACGAATTGCT CACACCAGAG
CAAGAACTCA CTTTGGGTAG AGAAGTGCAA GCAATGGTTG CACTTAATGA ACGCTGTCAA
CAAGCTGGAG GTCATGGACC AGAGTGCGAA TATTCAAGCG CAGAGAAGAA AAAATTTAAG
GCAGGGGAAC GGGCCAAGAA TCAAATGATC ACAGCAAATC TGAGGCTTGT TGTGAATTTG
GCCAAGCGCT ATCAAGGCAA AGGGCTTGAC CTTCTTGATT TAATTCAAGA GGGCACCTTA
GGATTAACAA GAGCTGTTGA GAAGTACGAT CCCAAAAGAG GTCATCGATT TTCAACTTAC
GCTTACTGGT GGATTAGGCA AGGACTAAAT AGAGCGCTAT CAACGCAAAG TAGAACAATA
CGAATTCCTG TAAACATAAA TGAGAAACTA ACAAAACTTC GTGCTGCCAA GTCTCGACTA
ATGCAAGAGC TTGGGGTTCA TCCCTCAACT AACCAGATAG CCATACAAAT GAAAATTCCT
TTAGAGGAAG TAGAGGAATT ACTTGCATGC GAGCTGAGAA GTATCACAGT GAGCTTGCAA
GGGGCAGTCA AATCTAAAGC AGACCCCTCT GAGCTTGTCG ATATTCTTCC AAGTGAAGAA
GTACCTCCCA TGGAACTAGC TGAATTAGCA GAGAGAAGTG CATCAGCTTG GTCGTTATTG
GATAAATCAA ATCTCACACC CAAAGAGAGA ACGATACTAA GCCTTCGATT TGGCCTAGAT
GGATCGAACG AATGGAGAAC TCTAGCCGAA GTCGCCAGAC AAATGAATTG CAGCAGGGAA
TATTGCAGAC AAGTAGTTCA ACGTGCATTA AGAAAGTTGA GAAAAACAGG GATTCAAAGT
GGTCTTTTAG AGAAAAGTAT TTAA
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| Protein sequence | MSSLSDFLGE IGRHELLTPE QELTLGREVQ AMVALNERCQ QAGGHGPECE YSSAEKKKFK
AGERAKNQMI TANLRLVVNL AKRYQGKGLD LLDLIQEGTL GLTRAVEKYD PKRGHRFSTY
AYWWIRQGLN RALSTQSRTI RIPVNINEKL TKLRAAKSRL MQELGVHPST NQIAIQMKIP
LEEVEELLAC ELRSITVSLQ GAVKSKADPS ELVDILPSEE VPPMELAELA ERSASAWSLL
DKSNLTPKER TILSLRFGLD GSNEWRTLAE VARQMNCSRE YCRQVVQRAL RKLRKTGIQS
GLLEKSI
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