| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_3115 |
|---|
| Symbol | |
|---|
| ID | 3580133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 3640669 |
|---|
| End bp | 3640986 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637686852 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_291171 |
|---|
| Protein GI | 72163514 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0759] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00278] conserved hypothetical protein YidD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0000000292784 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACGCG ACAGACCCAC CTTGCTCGCC CGGGTGTTGA TTCTGCCGAT CCGGGGCTAC
CAGCGTTGGA TCAGTCCGCT CTTTCCACCG GTCTGTCGTT TCTACCCCTC GTGCAGCAGT
TACGCGGTCG AGGCACTCCG GGTTCATGGG GCCGGACGAG GACTGTGGTT GACCATCCGC
AGACTTGGCA AATGTCATCC GTTCCATCCC GGCGGGCTTG ATCCAGTCCC GCCGCGGAGA
AACGAGAGTG GCACAGAGAT CAGTGACGCG AGGCCTGGCA GCGACGGGGA AGCCTCCCCC
GGCGCACCGG GTCTGTGA
|
|---|
| Protein sequence | MTRDRPTLLA RVLILPIRGY QRWISPLFPP VCRFYPSCSS YAVEALRVHG AGRGLWLTIR
RLGKCHPFHP GGLDPVPPRR NESGTEISDA RPGSDGEASP GAPGL
|
|---|
| |