Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_3113 |
Symbol | |
ID | 3580131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 3639051 |
End bp | 3639590 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637686850 |
Product | single-stranded nucleic acid binding R3H |
Protein accession | YP_291169 |
Protein GI | 72163512 |
COG category | [R] General function prediction only |
COG ID | [COG1847] Predicted RNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.167543 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGACA GCAACACCGG AGGCGGGGCG AACTCTGCGG TAGCGGTGGC CGAGAAAGCA GAAGAGACCG CCCCTATTGA CATCGAGGCA CTCGAGCGGG AAACCGATAT TGCCGCCGAC TACATCGAGG GCCTCCTCGA CATCGCCGAT TTCGATGGTG ACATCGATAT GGATGTCGAA GGAGACCGTC CCCTGGTCTC CGTGGTAGGG GTGACCATCA AGGAACTGGT GGGAGAGCGT GGTGAGGTTC TGGAGGCGCT CCAGGAGCTC ACTCGTCTTG CTGTGCACCG GGTCACCGGC ACCCGGAGCC GGCTCATGCT CGACATCGGC GGCTATCGCG AATCTCGGCG CAAGGTCCTT CGGAAACTGG GCGCCGAGGT GGCCAGAGAA GTCAAGCGGA CCGGCAAACC CAAGAAGCTC ACTCCGATGA CTCCTTTTGA ACGGAAAGTG GTGCACGACG CCGTGGCGGC GGCGGGTCTG CACAGTGAGT CTGAGGGTGA GGAGCCCAAC CGTTGCGTGG TGGTTTACCC GGTGGATTGA
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Protein sequence | MSDSNTGGGA NSAVAVAEKA EETAPIDIEA LERETDIAAD YIEGLLDIAD FDGDIDMDVE GDRPLVSVVG VTIKELVGER GEVLEALQEL TRLAVHRVTG TRSRLMLDIG GYRESRRKVL RKLGAEVARE VKRTGKPKKL TPMTPFERKV VHDAVAAAGL HSESEGEEPN RCVVVYPVD
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