Gene Tfu_3113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_3113 
Symbol 
ID3580131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp3639051 
End bp3639590 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content62% 
IMG OID637686850 
Productsingle-stranded nucleic acid binding R3H 
Protein accessionYP_291169 
Protein GI72163512 
COG category[R] General function prediction only 
COG ID[COG1847] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.167543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGACA GCAACACCGG AGGCGGGGCG AACTCTGCGG TAGCGGTGGC CGAGAAAGCA 
GAAGAGACCG CCCCTATTGA CATCGAGGCA CTCGAGCGGG AAACCGATAT TGCCGCCGAC
TACATCGAGG GCCTCCTCGA CATCGCCGAT TTCGATGGTG ACATCGATAT GGATGTCGAA
GGAGACCGTC CCCTGGTCTC CGTGGTAGGG GTGACCATCA AGGAACTGGT GGGAGAGCGT
GGTGAGGTTC TGGAGGCGCT CCAGGAGCTC ACTCGTCTTG CTGTGCACCG GGTCACCGGC
ACCCGGAGCC GGCTCATGCT CGACATCGGC GGCTATCGCG AATCTCGGCG CAAGGTCCTT
CGGAAACTGG GCGCCGAGGT GGCCAGAGAA GTCAAGCGGA CCGGCAAACC CAAGAAGCTC
ACTCCGATGA CTCCTTTTGA ACGGAAAGTG GTGCACGACG CCGTGGCGGC GGCGGGTCTG
CACAGTGAGT CTGAGGGTGA GGAGCCCAAC CGTTGCGTGG TGGTTTACCC GGTGGATTGA
 
Protein sequence
MSDSNTGGGA NSAVAVAEKA EETAPIDIEA LERETDIAAD YIEGLLDIAD FDGDIDMDVE 
GDRPLVSVVG VTIKELVGER GEVLEALQEL TRLAVHRVTG TRSRLMLDIG GYRESRRKVL
RKLGAEVARE VKRTGKPKKL TPMTPFERKV VHDAVAAAGL HSESEGEEPN RCVVVYPVD