Gene Tfu_3104 details

Gene Information

• Locus tag: Tfu_3104
• ID: 3581372
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 3628986
• End bp: 3630869
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637686841
• Product: virulence factor MVIN-like
• Protein accession: YP_291160
• Protein GI: 72163503
• COG category: [R] General function prediction only
• COG ID: [COG0728] Uncharacterized membrane protein, putative virulence factor
• TIGRFAM ID: [TIGR01695] integral membrane protein MviN

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGGAGAG CGCTGAAGAG GCCCGTTCCT GACCAGAGGC CGCGGTCTTC TACCCTGAAC 
TTCTGTTTCG ACGAGACCTT CCCACACGAC ATCTCGGCGC CGACGGGCGT GCCGTCGGCG 
CTATCGAAAG GAGCCACGCC GGTGGCGACC GACATCAGCA GCGCCAGCGA CGACCACACG 
GGCGGCCCTG CCAAGGACGC GGGGTCCCCT TCCCCCCACG CCGATTCGGC TGCCCCGCAG 
GCGGAGCAGG ACTCCACCGC CACGCCGGGC GGCATGATGC GCTCCAGCAT GGTCATGGCG 
GTCGGGACGA TGGTGTCTCG GGTCACCGGG TTCTTCCGTA CCGTCGTGCT CGCTGCAGCG 
CTGGGCACAC AGCTGCTCGG TGACGCCTAC AACGTCGCCA ACACGATCCC GTTCATCATC 
AACGACCTGC TCATCGGCGG TCTGATGGCG AGCGTGATCG TGCCGTTCCT GGTGCGGCGG 
CGCAAACGGG ACGCCGACGG CGGCAAGGCC ACGGAGGACC GCCTGTTCAC CAGTGCTGTC 
CTGGTGCTGC TGGTGGTGAC AGTGGCGGCG ATCCTGCTCG CGCGGCCGCT GATCCAGCTT 
TACGCGAGCG ACTTCCTGCC TGCGCAGGCC GAGGTGTCGG TCTACCTGGC GCGTTTCCTG 
CTCGCCCAGG TGTTCTTCGT CGGGATGAGC GGTCTCATCA GCGCCATGCT CAACACCCGG 
GGCAAGTTCG GCGCTCCGGT ATGGGCCCCT GTGCTCAACA ACCTGGTGAT CATCGCCGTC 
GGGGTGCTGT TCCTCATGGT GGGCACCGGA AGCACAGTGG AGACGGTGAC CACCGCCGAC 
AAGATCCTGT TGGGCGCGGG CACGAGCTGC GGCATGGTGC TGCAGACGGT GGTGCTGCTG 
GGCTCGCTGT GGCGGTCGGG ATACCGGTGG CGGCCCCGGC TGGACCTGCG CGGCTCCGGG 
CTGGGGGAGG CCCTGCGCAC GGCCGGGTGG ATGTTCCTGT ACACGCTCAC CACCCAGTTG 
GGTTTCGTGA TCACCTCCCA GATCGCCACC GGGGCCAACG TGGCCGCGAA TGCGCACGGG 
TCAGCGGACG CGGGCGCCGG TCTCACCGCC TACAGCTACG CCTACCAGCT TTTCCAACTG 
CCGTACGCGA TCATCGCGGT CTCGTTGATC ACGGTGCTGC TGCCGCAGAT GAGCGCGTTC 
GCTGCCGACC AGCGTTGGGA CGAGGTGCGT GCCGGGTTCT CCCGTACGCT GCGAGTTTCC 
GCGCTGATCC TGGTGCCGCT GTCGCTGGCG ATCTCGCTGT ACGCCACGGA GATCACGGTG 
CTGCTGTTCG CCCACGGCAA CACCGGCGAC AGCGACGCTG CCAACATCGG TTACATCCTC 
ATGGTGATGT CGCTCGGCCT GCTGCCGTTC AGCGTCTTCC AGTTGATGCT GCGTGTGTTC 
TACGCGCTGG GCGACACCCG CACCCCCGCG TTCCTGGGGA TCGCCAACAT CGCCGTGCAC 
GGCGTGCTGG CGCTGACCGC GTCCTGGCTG CTGCCGCCGC ACTTCGTGGT GGTTGGCGTG 
GCCGGCGGGT TCATGTCCTC GTTCCTGGTG GGAGTGTTCC TCGGCGGGCT CATCCTCCGC 
CGCCGGCTGG GCGGTTTGGA CGGGCGCCGT ATCGCCAGCA CGCTGGTCCG GCTCTACCTG 
GCGACCGCAC CCAGCGTGGT TGTGGGCTGG GGCGTGCTGG TTCTGTTCCA GTCGTGGTTC 
GTCTCGGGGC TGGCCGTCAA CATCGGTGCG CCCGTGGTGG GCTGCCTGGC AGGGCTCCCC 
GTGTTCCTGG TAGCGGCCAA GCTGCTGCGG ATCGATGAGC TGAGCGCGGT GATGGAGCTC 
GTCAAGTCCC GGTTGCGCCG GTAA 

 

Protein sequence

MGRALKRPVP DQRPRSSTLN FCFDETFPHD ISAPTGVPSA LSKGATPVAT DISSASDDHT 
GGPAKDAGSP SPHADSAAPQ AEQDSTATPG GMMRSSMVMA VGTMVSRVTG FFRTVVLAAA 
LGTQLLGDAY NVANTIPFII NDLLIGGLMA SVIVPFLVRR RKRDADGGKA TEDRLFTSAV 
LVLLVVTVAA ILLARPLIQL YASDFLPAQA EVSVYLARFL LAQVFFVGMS GLISAMLNTR 
GKFGAPVWAP VLNNLVIIAV GVLFLMVGTG STVETVTTAD KILLGAGTSC GMVLQTVVLL 
GSLWRSGYRW RPRLDLRGSG LGEALRTAGW MFLYTLTTQL GFVITSQIAT GANVAANAHG 
SADAGAGLTA YSYAYQLFQL PYAIIAVSLI TVLLPQMSAF AADQRWDEVR AGFSRTLRVS 
ALILVPLSLA ISLYATEITV LLFAHGNTGD SDAANIGYIL MVMSLGLLPF SVFQLMLRVF 
YALGDTRTPA FLGIANIAVH GVLALTASWL LPPHFVVVGV AGGFMSSFLV GVFLGGLILR 
RRLGGLDGRR IASTLVRLYL ATAPSVVVGW GVLVLFQSWF VSGLAVNIGA PVVGCLAGLP 
VFLVAAKLLR IDELSAVMEL VKSRLRR