Gene Tfu_3098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_3098 
Symbol 
ID3581366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp3620624 
End bp3621187 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content67% 
IMG OID637686835 
ProductPadR family transcriptional regulator 
Protein accessionYP_291154 
Protein GI72163497 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAC GCCGGGCCAG GGTGCTGGAG CTAGCCGTCC TCGGCCTGTT ATACGAGTCC 
CCGTTGCACG GGTACGGACT GCGCAAGCGC CTCAACTCCG AACTGGGGTT CTTCCGGGCC
TTCTCCTACG GGTCGCTGTA CCCCTGCCTG AAGAGGATGC TGCGTCGGGG GCATATCTCC
CAGCACCCCG AGGAGACCGG ATTCGGGCGG ACCCGGATCG TGTACCGCCT CACCGAGGCT
GGACACCAGC ACCTGCACGG GATGCTCGAC GAGGTCACCC CAGCGGCCTG CGACGACGAG
TCCTTCGGCG TGTACTTCGC CCTCTTCGGG CACGCCAGAT CGGACCTTCG GCTGCGCATT
CTGCACGGTC GCCGCGATCG GCTTCTCACC CGGCTGAAGG AGTTGCGCTC CCGCCTGGCC
CACACCGCTG ACGACTATCT GCGGGAACTG CGCCGCCACG GAGCCGAGTC CGTGGAGCGG
GAGATCCATT GGCTTGACGG GCTTATCGCG CGGGAACAGC GCCTCGCTGC ACTCTCCCCG
TCTCAGCCGG GACCATTGGG ATGA
 
Protein sequence
MSARRARVLE LAVLGLLYES PLHGYGLRKR LNSELGFFRA FSYGSLYPCL KRMLRRGHIS 
QHPEETGFGR TRIVYRLTEA GHQHLHGMLD EVTPAACDDE SFGVYFALFG HARSDLRLRI
LHGRRDRLLT RLKELRSRLA HTADDYLREL RRHGAESVER EIHWLDGLIA REQRLAALSP
SQPGPLG