| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_3097 |
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| Symbol | |
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| ID | 3581365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 3617067 |
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| End bp | 3619952 |
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| Gene Length | 2886 bp |
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| Protein Length | 961 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637686834 |
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| Product | putative penicillin-binding protein |
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| Protein accession | YP_291153 |
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| Protein GI | 72163496 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCCGGG GCTGCACTGC CTCTCCCAGA AGTCGACAGG CCGGTCGGCC TTCAATAGAC
GAACGAGGAC GCGTGAGTAC CGAAAGACGA CGGAGTGCTG GCGGTCGCCG CCGGGCCGAT
GGCCCGATGG GTGAACCGCG CGGCGACGGC GGTAGGCGTA GCCGCGACGG CTACGCCGCG
GACGAGCGCG CCGCGGCGGG TCGCCGTAGG CCGCGGGAGG ACGACGGTTT CTGGGCTGAC
GAGCCCGGGC GCCGTGCCCG CGGGTCGCTG GGCGACTATG AAGATCGGCC GCGCCGCTCT
CGGAGCAGAG AGGACTTCGG TGATCGTCCA CGTCGTTCCC GTGACCCACG GGACGACTAC
TTCGACGAGT CCCCGCGCCG CACTCGGGCG CCGCGAGGCG AGGACGAGTA CCGTCCGCGG
CGGCGGGCCG CTGATGAGAC GGCCGTGCTC GGCAGTGGCG GGGCACCGGG TCGCCGGAGG
AGCCGAGATT CCGGCCATCC CGAGGACGGG CGTCCAGCGC GTCGCCGACG TGCCGAGGAT
GAAGGATACA GCGGACGTCG TCGGGCAAGC GCGGCCCACT CGGGGAGTGG CGGCGGACGG
CGCCGCCGGT CCTGGGAGGA CGAGGACGAG TACGACGAGA GAGGGCCCGT CCGGCGCTTC
TTCGCCAAAG CGTGGAAGCC CACGCTCATC ACCATGGCGG TGCTGTTCGT CCTCGGGGTC
GCGGGGATCG GCATCGCCTA CGCCATGGCC CCCTCCCATG AAGACCTTGA GGCCAAAGCC
GACGTCAAGC TCGCAGCGAA CGTCGTCTAC TTCGAGGACG GCAAGACCGA GGCCACCAGG
TTCGGGGAAG TCGACCGGGT GCCGGTCGGT ATCGAGCAGG TGCCGCAGAC CGTGATCGAC
GGTGTCCTCG CGGCCGAGCA CCGCACCTTC TACGAGGACA ACGCGATCAA CCTGATGGGT
CTGCTCCGCG GTCTCGTCTT CGGCGGTACG CAAGGTGGTG GTTCGACCAT CACCCAGCAG
ATGGCCCGGA ACTACTACGA CTCGCTGACC ACCAACGAGT CGTCCACGAT CGACCGGTAC
GTCCGTAAGT TCAACGAGAT CCTCATCGCG TTCAAGGTCG AGCAGAGCCT GACGAAGGAC
GAGATCCTCG AGCAGTACCT CAACACCATT TACTTCGGGC GCGGCATCGG GGTGCAGGCA
GCCGCCCAGG GGTACTTCGG CAAGGACGTC AGTGAACTCG ACGCCGCTGA GGGTGCGTTC
ATCGGCACGG TGATCCAGCA GCCGGGCAAC TTCGGCACTG CGGTCCCCGA CTCCGAGATG
TACGAGATCC TCAAGGAGCG GTGGCAGTAC ACGGTGAACG GCCTCGTCGA GATGCACGAG
GAGAACCCCG AGCGCGGTCT TAGCCGCGAA GAGGCCGACA AACTGGAGTT CCCCGACCCG
CTGCCGCTCG AAGCCGACGA CTCGTACGCG GGCTACCGCG GCTACATCCA GGAGGCGGTC
CGCAGCGAGC TGGAGTCCCG CTACGGGCTG ACCCCGGAGC AGATTGCGCG CGGCGGCTAC
CAGGTGACCA CTTCGCTCAA CGAGAAGTGG ATGCAGTACG CCGAGGAAGT CGTCGAGGAG
CAGAAAGAAC GGACGCTGAA CAACACCGGC CAGGAGATCC CGGAGGAGAC CCAGTTCGGT
ATCGCCATGG TCGATACCTC CACCGGTGAG ATCAAGGCGT TCTACGGCGG TCCGGACCCC
ACCCAGTACG CCAACCAGTC TCTGGTGCAG CGGCAGCAAG CCGGCTCCGC GTTCAAGCCG
TACGTGCTGG CCACTGCGTT GGAGCAGGGC ATCAGCCTGC GGAGCATCTA CGACGGCGAC
AGCCCGAAGG AGTTCCCGGG CCTGGCCCAG CCGGTCAGGA ACGACGGCAA CCGCAGCTAC
GGTCCGGTCG ACTTGATCCA GTCCACCCGG GACTCGATCA ACACCAGCTA CGTGCAGTTG
GCGATCGAGG TCGGCCCGCA GGCGGTGATC GAGACCGCGC TGGCCGCGGG AATCCCGGAG
AAGCAGTTGG AAACGGCCGA GATCGGTCCC AACATCGCGC TGGGCACCAT GTCGGTCGCC
GCGGTCGACC AGGCGGCCGG GTTCGCGACT TTCGCCAACG GCGGTTACCA CATGCCGCAG
CACTTGATCG CTAAGGTGGT GGACACCGAG ACCGGCGAGG AGCTGCAGCC GAAGGACGCC
GACATTCTGG AGTCCGGTGG CACCCGGGCG TTCAGCGCAG AGACGGCGGC CGACGCTACT
TACGCGATGC AACAGGTCAT CACCGACAAC CACAACGCCA AGCTGGACGA CGGCCGTCCC
ATGGCCGGCA AGACCGGTAC CTCCAACAAC GCCGTGTCCG CGTGGTTTGT GGGCTTTGTG
CCGCAGTACT CCACTGCGGT GGGACTGCAT CGCACCGACG GCGAACCGCT CGTGCTGCCT
GGTGAGGCCA GCATCTACGG TGGTCAAATG CCAGCCCGGT TGTGGAAGGC GTTCATGACC
AAGGTGCTGG AGGACGTGCC TCCCGAAGAG TTCCCCCAGC CGGTGTTCGG CGGCGAGGTG
CGCAACCACG CACCGACTCC GAGCCCGGAT CCTTCGCCTT CGCAGGAGCC GGAGGAGACC
GAGGAGCCGA CCACCGAGCC GAGCATGCCG CTTCCCTCGT TCACTCCGCC GGGTCGGGGC
GACGAGCCGA ACTGCGACAT CCAGTGGTGG CTGCCGGAGT GCCGCCAGGA TGACGAGCCG
CCCGGCGACG GGGAGCCGAC TTCTCCGCCT GACGAGCCGG GCCAGCCGGG CACCGGGCCT
GGCCCCGGCG GTATCGGCGG TCCGGGGTGG AACAGTAACC AGATCGCTTA CCGGGGCCGG
GAGTGA
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| Protein sequence | MVRGCTASPR SRQAGRPSID ERGRVSTERR RSAGGRRRAD GPMGEPRGDG GRRSRDGYAA
DERAAAGRRR PREDDGFWAD EPGRRARGSL GDYEDRPRRS RSREDFGDRP RRSRDPRDDY
FDESPRRTRA PRGEDEYRPR RRAADETAVL GSGGAPGRRR SRDSGHPEDG RPARRRRAED
EGYSGRRRAS AAHSGSGGGR RRRSWEDEDE YDERGPVRRF FAKAWKPTLI TMAVLFVLGV
AGIGIAYAMA PSHEDLEAKA DVKLAANVVY FEDGKTEATR FGEVDRVPVG IEQVPQTVID
GVLAAEHRTF YEDNAINLMG LLRGLVFGGT QGGGSTITQQ MARNYYDSLT TNESSTIDRY
VRKFNEILIA FKVEQSLTKD EILEQYLNTI YFGRGIGVQA AAQGYFGKDV SELDAAEGAF
IGTVIQQPGN FGTAVPDSEM YEILKERWQY TVNGLVEMHE ENPERGLSRE EADKLEFPDP
LPLEADDSYA GYRGYIQEAV RSELESRYGL TPEQIARGGY QVTTSLNEKW MQYAEEVVEE
QKERTLNNTG QEIPEETQFG IAMVDTSTGE IKAFYGGPDP TQYANQSLVQ RQQAGSAFKP
YVLATALEQG ISLRSIYDGD SPKEFPGLAQ PVRNDGNRSY GPVDLIQSTR DSINTSYVQL
AIEVGPQAVI ETALAAGIPE KQLETAEIGP NIALGTMSVA AVDQAAGFAT FANGGYHMPQ
HLIAKVVDTE TGEELQPKDA DILESGGTRA FSAETAADAT YAMQQVITDN HNAKLDDGRP
MAGKTGTSNN AVSAWFVGFV PQYSTAVGLH RTDGEPLVLP GEASIYGGQM PARLWKAFMT
KVLEDVPPEE FPQPVFGGEV RNHAPTPSPD PSPSQEPEET EEPTTEPSMP LPSFTPPGRG
DEPNCDIQWW LPECRQDDEP PGDGEPTSPP DEPGQPGTGP GPGGIGGPGW NSNQIAYRGR
E
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