Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_3093 |
Symbol | rpsR |
ID | 3581361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 3614393 |
End bp | 3614629 |
Gene Length | 237 bp |
Protein Length | 78 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637686830 |
Product | 30S ribosomal protein S18 |
Protein accession | YP_291149 |
Protein GI | 72163492 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0238] Ribosomal protein S18 |
TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0103903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGAAGC CACCAGTCCG CAAACCCAAG AAGAAGGTTT GCGTGTTCTG CCAGGAGAAG ATGACCTACG TCGACTACAA GGACACGACT CTCCTGCGCA AGTTCATTTC CGACCGCGGT AAGATCCGCG CCCGCCGCGT CACCGGCAAC TGCACGCAGC ACCAGCGCGA CGTCGCCAAG GCCGTGAAGA ACGCCCGCGA AATGGCGCTG CTGCCCTACA CGAGCAGCGC CCGCTGA
|
Protein sequence | MAKPPVRKPK KKVCVFCQEK MTYVDYKDTT LLRKFISDRG KIRARRVTGN CTQHQRDVAK AVKNAREMAL LPYTSSAR
|
| |