| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_3084 |
|---|
| Symbol | |
|---|
| ID | 3580084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 3605369 |
|---|
| End bp | 3606154 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637686821 |
|---|
| Product | membrane permease protein |
|---|
| Protein accession | YP_291140 |
|---|
| Protein GI | 72163483 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTTGTTG CGGCAGGACT GTTCGGCGCC CTCATCGGGC TGCTTCTCGG ACTCCTCGGC
GGAGGCGGGT CCATTCTGGC GGTGCCTGCC CTGGTCTACG GGGTGGGCCT CCCGCTGACC
GCCGCGATCC CAGCCTCCCT GGTCGTGGTC GGCGCCTCGT CGGCCACCGG CCTGCTCACC
CGGATCCGCG CCGGGCTCGT CCGCTGGCGG GTCGCCCTGG TCTTCGGACT GGCAGGACTG
CCCGCCGCCT TCGGAGGCAG CGCGGTAGGC AGGCTCCTGC CCAACCACTG GCTGATGCTC
GCGTTCGCGG CGCTCATGGT TGTGGTGGCC GTGCGCATGC TGCGGCAGTC CACCCCTGCG
GTGGGGGCCT GCCGGGGCGC GTCCGGAACC GTGGACTGGC GCGCCTGCCT GCCCTGGGCG
ACGCTGGCGG GCGCTCTCGT CGGATTCCTC ACCGGCCTCT TCGGGGTCGG CGGTGGATTC
GTCATCGTCC CGGCACTCAG CCTCGGCCTC GGCCTCGCCG AATCCGAGGC GGTGGCCACC
TCGCTGGCCG TCATCGTCCT CAACTCGGTG TCCGGACTCG CCGCCCACAG TCTCACGCCC
ACCGGCCTCG ACGTCGCCAC TGTCGGAGTC TTCGCAGCAA GCGCCATGGC GACCTCGCTC
GCTGCTGGAA CCCTGGCCCC GCGCCTGCCC GCAGCTGCGC TGCGGCGCGG ATTCGCCGCC
CTCGTCCTCG CCGTCGCCGC AGGAGTCGCC GCAACATCCC TGACCGCTCC CGAACTGCTC
TGGTAA
|
|---|
| Protein sequence | MVVAAGLFGA LIGLLLGLLG GGGSILAVPA LVYGVGLPLT AAIPASLVVV GASSATGLLT
RIRAGLVRWR VALVFGLAGL PAAFGGSAVG RLLPNHWLML AFAALMVVVA VRMLRQSTPA
VGACRGASGT VDWRACLPWA TLAGALVGFL TGLFGVGGGF VIVPALSLGL GLAESEAVAT
SLAVIVLNSV SGLAAHSLTP TGLDVATVGV FAASAMATSL AAGTLAPRLP AAALRRGFAA
LVLAVAAGVA ATSLTAPELL W
|
|---|
| |