| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_3076 |
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| Symbol | |
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| ID | 3580076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 3598495 |
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| End bp | 3599487 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637686813 |
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| Product | phytoene synthase |
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| Protein accession | YP_291132 |
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| Protein GI | 72163475 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.270581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCGGG AACTGCGGGC CGCGGGCATC ACCGACCCCC AGCTGTGCGC GGCCTACCTG
CACTGCCGGA CGCTGCACGC CCACCACGGG CGCACCTACT ATCTGGCCAC GCTCACCCTC
CCCCCGCAGC GGAGGCCCGC GATCCACGCC CTCTACGGCT TCGCGCGCTG GGTGGACGAC
GTCATCGACG CGCCACGCAC CGCCCTCCCC GTGGAGGCGC GGGCTGCCCT GCTGTCCGAA
GTCGGCACCG AGCTGACCGC TGCCCTGGCG GGGGGAGAGG ACGTCCACCC GGTGGTGCGC
GCTGTGGCGG ACACCGCGCG GCGGTACGAG ATCGGCGCCG AACTGTTCAC GGCGTTCCTG
CGGTCCATGC GGATGGACCT GTCCACCACC GACTATGCGA GCTTCGAAGA CCTGCGCGGC
TACATGTACG GCTCGGCCGC GGTGATCGGG CTCCAAGTGC TGCCGGTGCT CGGCACCGTG
GTCCCGCTGC CGCGGGCTGC CCCGCATGCG GCAGCGCTCG GCGAGGCGTT CCAGTTGACC
AACTTCCTGC GGGATGTGGC TGAAGACCTG GACCGGGGGC GGGTCTACCT GCCCGCGGAC
ATCCTGGCCC GCTACGGGGT GGACCGGGAC CTGCTGTTGT GGTGCCGTGC TCACCGGCGC
GGGCATCCGC GGGTGCGGGA CGCGCTCGCC CACCTGGTGG CGTTGAACCG GGAGATCTAC
CGGACGGCTG CCCCGGGCAT CGCGATGCTC GACCCGGTGT CGCGTCCCTG CGTCGCTACT
GCGTTCACCC TGTACCAGGG GATTCTCGAC GTCATCGAAG CATCCGGCTT CGACGTGTGG
AGCGGTCGGT GCACCGTGCC GCAGTGGCGG CGCGTGCAGG TAGCGGTTCC CGCCTTCGCC
CGGGCCATGC TGCGCCGGGC GGTGTCGGGA CGCCGGGCGA ACAGTGGGGT GGCGCCGCGG
ATGAGCGGCG CTCGGAGTTA CGGGGGGAAT TGA
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| Protein sequence | MKRELRAAGI TDPQLCAAYL HCRTLHAHHG RTYYLATLTL PPQRRPAIHA LYGFARWVDD
VIDAPRTALP VEARAALLSE VGTELTAALA GGEDVHPVVR AVADTARRYE IGAELFTAFL
RSMRMDLSTT DYASFEDLRG YMYGSAAVIG LQVLPVLGTV VPLPRAAPHA AALGEAFQLT
NFLRDVAEDL DRGRVYLPAD ILARYGVDRD LLLWCRAHRR GHPRVRDALA HLVALNREIY
RTAAPGIAML DPVSRPCVAT AFTLYQGILD VIEASGFDVW SGRCTVPQWR RVQVAVPAFA
RAMLRRAVSG RRANSGVAPR MSGARSYGGN
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