Gene Tfu_3050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_3050 
Symbol 
ID3580813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp3567014 
End bp3568009 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content65% 
IMG OID637686782 
Productdehydrogenase complex, E1 component, beta subunit 
Protein accessionYP_291106 
Protein GI72163449 
COG category[C] Energy production and conversion 
COG ID[COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGTCA TCACCTACCG TCAGGCCCTG CGCGACACCC TGCGTGCCGA GATGCACCGC 
GACGAAAACG TCTTCCTCAT GGGTGAGGAG ATCGGCGTTT TCGAGGGCTC CTACAAGATC
ACTGAAGGCC TCCTCAAAGA GTTCGGGGAG CGGCGCGTCC GCGACACCCC CATCGCCGAG
GAGGGGTTCG TCGGTGCAGC CGTCGGCGCA GCCATGCTCG GCCTGCGCCC GGTCGTCGAA
ATCATGACGA TCAACTTCTC CCTGCTCGCC CTGGACCAGA TCGTCAACCA TGCCGCGAAG
ATCTACGGCA TGTTCGGCGG CCAGAACAGT GTGCCGATGG TGATCCGCAC CCCGGGCGGC
GGCGGCCAGC AGCTCGGCGC CACCCACTCG CAGAACGTCG AGCTGTACTA CGCGTTCGTG
CCCGGGCTGA AAGTCGTGGC GCCCAGCACG CCCGCTGACG CCGCAGCCCT GCTGCGTGCC
GCGATCCGCG ACGACGACCC GGTGCTCTTC CTGGAGAACC TCGGCCTGTA CAACACGAAG
GGCGAAGTCC CCGACGAAGA AGTCGTCGGC GAAATCGGCC GGGCCGCCGT CGTCCGTGAA
GGCACCGACA TCACCCTCGT CGGCTACTCC CGGATGGCCA TGATCGCCAC TCAGGTGGCG
GACCGACTCG CTGAAGAGGG AATCAGTGTC GAGGTCGTTG ACCTGCGCTC CCTGCGTCCG
CTAGACCGGG AGACGATCGT GAACTCGGTG AAGAAGACCG GGTGTGCGGT CGTTGCCGAA
GACGACTGGT TGACCTATGG GATCGGCGCG GAAATCGCCG CATCCATTCA AGAAGGCGCA
TTCGACTACC TCGACGCTCC GGTGCGCCGG GTGGCGATGG CCGAAGTGCC CTTGCCGTAC
GCCAAGCCGT TGGAGAACGC CGCACTGCCG TCAGCGGAGT CGGTCACGAC CGTGATCTAC
GAAACCCTGA GAGCCGTCGG CCGGAGAGTC GGTTAA
 
Protein sequence
MPVITYRQAL RDTLRAEMHR DENVFLMGEE IGVFEGSYKI TEGLLKEFGE RRVRDTPIAE 
EGFVGAAVGA AMLGLRPVVE IMTINFSLLA LDQIVNHAAK IYGMFGGQNS VPMVIRTPGG
GGQQLGATHS QNVELYYAFV PGLKVVAPST PADAAALLRA AIRDDDPVLF LENLGLYNTK
GEVPDEEVVG EIGRAAVVRE GTDITLVGYS RMAMIATQVA DRLAEEGISV EVVDLRSLRP
LDRETIVNSV KKTGCAVVAE DDWLTYGIGA EIAASIQEGA FDYLDAPVRR VAMAEVPLPY
AKPLENAALP SAESVTTVIY ETLRAVGRRV G