Gene Tfu_3048 details

Gene Information

• Locus tag: Tfu_3048
• ID: 3580811
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 3564947
• End bp: 3565624
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637686780
• Product: GntR family transcriptional regulator
• Protein accession: YP_291104
• Protein GI: 72163447
• COG category: [K] Transcription
• COG ID: [COG1802] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCGAAC TTTCCCAGAA ACCGGGGGAC GCCTCCCGTC TGGATCGCAA TCCGCTCCGC 
GAACAGATCC GCCGCGTCCT AGTCGACGGC TTGCTCTCCG GCCGGTGGAA GCCGGGAGAG 
CGGATTGTGG AGCGCCGGGT GGCAGCCGAG CTCAACGTGA GCCAGGCCCC GGTCCGTGAA 
GCCCTGCGCG AACTCGAAGC ACTGCGGTTG ATCGAATCAG TGCCCAACAA GGGCGCCCGG 
GTCCGAGACT TCGGCGTCGC GGACATGGCC GAGATCTATC CGGTGCGTGC CGGACTGGAA 
CTGGTCGCGG CCCGCCTCGC CGCTCCCCGC CTCGCGGAAG ACATCCGGCC ACTGGAACGC 
GAAGTGGAAG CGCTGCGCGA AGCCACCGCC GCGGGAGACG TGGACGGACA GATCAAACAC 
AGCGTCGAAT TCCACCGCGA AATCGTGCGC GCCGCCCACA ACAGTGTGCT GCTGCACACC 
TGGGAATCGC TGGGCGTGGA AGTGTGGACC GCGCTTTCTG TGCGCTGGCT CAACATGGAG 
CTCCATGCCA AGGTCGCCGA CCACTGGGCG ATCACCCAGG CGTTCCGCAA CCGGGACCCC 
CACGTCGGCC AGATGCTCAG CGACCACGTG CTCAACTACG TCGAGGCGGC ACTGCGCTCC 
CGCGACTCCG TGAGTTGA 

 

Protein sequence

MVELSQKPGD ASRLDRNPLR EQIRRVLVDG LLSGRWKPGE RIVERRVAAE LNVSQAPVRE 
ALRELEALRL IESVPNKGAR VRDFGVADMA EIYPVRAGLE LVAARLAAPR LAEDIRPLER 
EVEALREATA AGDVDGQIKH SVEFHREIVR AAHNSVLLHT WESLGVEVWT ALSVRWLNME 
LHAKVADHWA ITQAFRNRDP HVGQMLSDHV LNYVEAALRS RDSVS