Gene Tfu_3008 details

Gene Information

• Locus tag: Tfu_3008
• Symbol: pyrE
• ID: 3579248
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 3522681
• End bp: 3523214
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637686739
• Product: orotate phosphoribosyltransferase
• Protein accession: YP_291064
• Protein GI: 72163407
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0461] Orotate phosphoribosyltransferase
• TIGRFAM ID: [TIGR00336] orotate phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 43
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGACC GCGACGATCT TCTCCGACAG ATCAACGATA AGGCCGTTGT CCGCGGCAGG 
GTGATCCTCT CCTCCGGAGC CGAGGCGGAC TACTACGTGG ACCTGCGGAA AATCACCCTG 
GACGGGCAGA GCGCACCGCT GGTGGGACGC GTGATGCTGG ACTTGACCGC CGACCTGGAC 
TACGAGGCGG TGGGCGGATT GACCCTGGGT GCGGACCCGG TGGCCACAGC CATGATGCAC 
GCGGCAGCGG CGCAAGGGCG GCGCCTGGAC GCGTTCGTGG TGCGCAAGGA GAGCAAGACG 
CACGGCTTGC AGCGCCGGAT CGAAGGCCCC GACGTCCGCG GCCGTCGCGT CCTCGCGGTG 
GAAGACACGT CAACCACCGG GGGGTCGGTG CTGACCGCAG TCTCCGCGCT GCGCGAAGCC 
GGTGCTGACG TCGTGGGCGT GGCCGTGATT GTGGACCGGG GCGCCCGGGA CCGGATCGTC 
AGTGAAGGGC TGACCTATCG GGCCGCCTAC ACACTCGACG ATCTGGAAAT CTGA 

 

Protein sequence

MSDRDDLLRQ INDKAVVRGR VILSSGAEAD YYVDLRKITL DGQSAPLVGR VMLDLTADLD 
YEAVGGLTLG ADPVATAMMH AAAAQGRRLD AFVVRKESKT HGLQRRIEGP DVRGRRVLAV 
EDTSTTGGSV LTAVSALREA GADVVGVAVI VDRGARDRIV SEGLTYRAAY TLDDLEI