| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_3001 |
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| Symbol | |
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| ID | 3579241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 3514045 |
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| End bp | 3516510 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637686732 |
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| Product | ribonucleoside-diphosphate reductase |
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| Protein accession | YP_291057 |
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| Protein GI | 72163400 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCGGA TCAGAAAGGT GGTAGCCGAG GCGTGCCAAG GGCTGCCCGG CGCGTCAGCA
GAGACGGTGA TCGCGGAAGC CACGCGCGGG TTCTACCCGG GTATCACCCC CGCTGAGCTT
GAACTCGCCC TGATCATGGC GGCGCGCACG TTCGTTGAAA CCGACCCCGA CTACTCCTAT
GTCAGCGCCC GGCTCCTGTT GGACAAGCTG CGCCGGGAAG CCCTGACGTT CCTCAGCGGA
CACCCGGATG AGGCCACCCA CGCCGACATG GCTCGGCGCT ACCCCGAATA CCTGCGCGCC
TTCATCACGC GCGGTATCGA ACTGGAGCAC CTCACGCCCG AGCTCGCCGA CTTCGACCTG
GACCGGCTCG GTGCCGCGCT CCGCCCCGAA CGCGACCTGA ACTTCACCTA CCTGGGCCTG
CAGACCCTCT ACGACCGCTA CTTCCTGCAC CACGAAGGCA CCCGCTACGA ACTGCCGCAG
GCGTTCCTCA TGCGGGTCGC TATGGGCGTG GCGCTCCACG AAGACGACCG GAACGCGCGG
GCCATCGAGT TCTATGAACT GCTGTCGTCG TTCGACTTCA TGTGCTCCAC GCCCACCCTG
TTCAACGCAG GCACCCGGCG TCCGCAGCTC TCCTCCTGCT TCCTCACCAC TGTCGGCGAC
GACCTCGCGG AGATCTTCCG CGCCATCAGC AACAACGCCC TGCTGTCCAA GTACTCGGGC
GGTCTCGGCA ACGACTGGAC CCCGGTGCGC GGCCTAGGCG CCCACATCAA AGGCACCAAC
GGCAAAAGCC AGGGCGTCGT CCCGTTCCTC AAGATCGCCA ACGACACAGC GGTGGCGGTG
AACCAGGGCG GCAAACGCAA AGGAGCGGTC TGCGCCTACC TGGAGACCTG GCACATCGAC
ATCGAGGAAT TCCTCGACCT GCGGAAGAAC ACCGGTGACG AGCGCCGCCG CACCCACGAC
ATGAACACCG CCAACTGGGT GCCCGACCTG TTCCTCGAAC GGGTGGAGAG CGACGCCCAG
TGGACCCTGT TCTCCCCCGA CGAAGTGCCG GACCTGCACG ACCGCTACGG CGAGGACTTC
GCCCGCGCCT ACGTCGCCTA TGAGCGTGCC GCGGACCGAG GGGAGATCCG CGTGTTTCGC
CGGGTGCGCG CCGTGGACTT GTGGCGGCGC ATGCTCACCA TGCTGTTCGA GACCGGGCAC
CCGTGGATCA CCTTCAAAGA CCCGTGCAAC CTGCGGTCCC CGCAGCAGCA CGCCGGGGTC
GTCCACTCGT CCAACCTGTG CACCGAGATC ACCCTCAACA CCAGCCTCGA CGAGGTCGCT
GTCTGCAACT TGGGCTCGGT GAACCTGGCC AACCACGTCG GCCCCGACGG GTTGGACGCG
GAACGGCTGC GCCGCACCGT GCGCACCGCG GTGCGCATGC TCGACAACGT CATCGACGTG
AACCTGTACA CCATCCCCGA GGCGGAACGC GCCAACATGC GGCACCGCCC GATCGGCCTG
GGGCTGATGG GCTACCAGGA CGCGCTGTTC ACGCTGCGGC TGCCCGTCGC CTCCCCCGAG
GCCGTGGAGT TCGCGGATGA GAGCATGGAG CTGCTCAGCT ACTACGCCAT CGAAGCGTCC
GCGGACCTGG CGGCGGAACG CGGCAGCTAC TCCTCGTTTG AAGGGTCGTT GTGGAGCAGA
GGCATCCTGC CGATCGACTC GCTGGAGCTG CTCGCTGAGG CGCGCCGCGG CGACCTGGAT
GTGGACCGCA CCCAGCGGCT GGACTGGGAC ACGCTGCGGG AGAAGGTGCG CACCACGGGG
ATGCGCAACT CCAACGTGAT GGCGATCGCG CCCACCGCCA CCATCGCCAA CATCGTCGGA
GTCAACCCGT CGATCGAGCC GCTCTACCGC AACCTCTACG TCAAAGCGAA CATGTCCGGC
GACTTCACCG TCGTCAACCC TTCCCTGGTG CGCGACCTGA AAGAGCGCGG CCTGTGGGAC
GAGGAGATGG TGACGGCGTT GAAGCTCCAC GACGGCAGCC TCGGCCCGAT CGACCGGGTG
CCCGAGGACT TGAAGAACCT GTACGCCACC GCTTTCGAAA TCGACCCGAT CTGGCTGGTC
GACGCCGCAT CCCGGCGGCA GAAGTGGATC GACCAGGCGC AGTCGTTGAA CCTCTACATG
GCTGAGCCGA GCGGCCGCAA GCTCGACGAG CTGTACCGGC GGGCCTGGCG CAAAGGCTTG
AAGACCACCT ACTACCTGCG GTCGCAGGGG GCGACGCACG TGGAGAAGAG CACGCTGCGG
GGCACGGACG GCAGGCTCAA CGCGGTCACC CCGGTGGCGG TCTCCGCTCC CAGCCCTTCG
CCGACCCCTG CCCCACGCCC GGCGGCTGCA CCGCCGCGGT CCGCCGCCGG ACCGGCTCCG
GACCTCACCG CCGAGGCTGC CGCGTTCTGC GCGGTGGACG ACCCCGAGTG CGAAGCCTGC
CAGTAG
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| Protein sequence | MERIRKVVAE ACQGLPGASA ETVIAEATRG FYPGITPAEL ELALIMAART FVETDPDYSY
VSARLLLDKL RREALTFLSG HPDEATHADM ARRYPEYLRA FITRGIELEH LTPELADFDL
DRLGAALRPE RDLNFTYLGL QTLYDRYFLH HEGTRYELPQ AFLMRVAMGV ALHEDDRNAR
AIEFYELLSS FDFMCSTPTL FNAGTRRPQL SSCFLTTVGD DLAEIFRAIS NNALLSKYSG
GLGNDWTPVR GLGAHIKGTN GKSQGVVPFL KIANDTAVAV NQGGKRKGAV CAYLETWHID
IEEFLDLRKN TGDERRRTHD MNTANWVPDL FLERVESDAQ WTLFSPDEVP DLHDRYGEDF
ARAYVAYERA ADRGEIRVFR RVRAVDLWRR MLTMLFETGH PWITFKDPCN LRSPQQHAGV
VHSSNLCTEI TLNTSLDEVA VCNLGSVNLA NHVGPDGLDA ERLRRTVRTA VRMLDNVIDV
NLYTIPEAER ANMRHRPIGL GLMGYQDALF TLRLPVASPE AVEFADESME LLSYYAIEAS
ADLAAERGSY SSFEGSLWSR GILPIDSLEL LAEARRGDLD VDRTQRLDWD TLREKVRTTG
MRNSNVMAIA PTATIANIVG VNPSIEPLYR NLYVKANMSG DFTVVNPSLV RDLKERGLWD
EEMVTALKLH DGSLGPIDRV PEDLKNLYAT AFEIDPIWLV DAASRRQKWI DQAQSLNLYM
AEPSGRKLDE LYRRAWRKGL KTTYYLRSQG ATHVEKSTLR GTDGRLNAVT PVAVSAPSPS
PTPAPRPAAA PPRSAAGPAP DLTAEAAAFC AVDDPECEAC Q
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