| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2930 |
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| Symbol | |
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| ID | 3580196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 3444411 |
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| End bp | 3445487 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637686659 |
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| Product | glycine betaine/L-proline transport ATP-binding subunit |
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| Protein accession | YP_290986 |
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| Protein GI | 72163329 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCAGCTG TACGCGCGAA CCACCTGTAC AAGGTGTTCG GCAAACGAGC ATCCCAAGCC
GTCGCACTGT TGTCGGACGG GCGCCACCGC GACACGATCA AGGACCTGAA CGTCACAGCC
GCGGTCATCG ACGTCTCCTT CGAAGTCCAG CCAGGTGAGA TCTTCGTGGT CATGGGGCTT
TCCGGGTCCG GGAAGTCCAC GTTGATCCGC ATGCTCAACG GGCTGCTGCC GCCGACTGCG
GGGACAGTGG AGATCGACGG AACCGACATC ACCACCCTGT CCCGGCGTGC CCTGCGCGCC
CTGCGCGGCG AAAAGATCAG CATGGTCTTC CAGCACTTTG CGCTCCTCCC GCACCGCACT
GTGCTGGAGA ACGCCGCCTA CGGGCTGGAA GTCCGCGGGG TGTCGCGTGC CGAGCGCCAC
GAACGCGCCG CGCACGCCCT CGACCTGGTC GGACTGGGCG ACTGGAAGGA CCACCTGCCC
AACCAGCTTT CCGGTGGGAT GCAACAGCGC GTCGGCTTGG CACGGGCGTT GACCGCCGAC
ACCGACATCA TCCTCATGGA CGAGGCGTTC AGCGCCCTCG ACCCGCTGAT CCGCCGCGAC
ATGCAGACCC AGCTCCTGCA ACTCCAGGCG GAACTGGGGA AGACCATCGT CTTCATCACC
CACGACCTGA ACGAGGCGAT GCGCCTCGGC AACCGCATCT GCGTGCTCCG CGACGGGCGT
GTCGTCCAGA TCGGCACCCC CGAGGAGATC CTCAACCACC CGGCCGACGA CTACGTGGCC
CGGTTCACCG AGGACGTGGA CCGCAGCCGC GTGCTCACCG CGGCCTCCGT CATGGAGCCC
GCTCCCAAGG CCGAGGCTGC CGACTGGGAG CGCGTGGCAC CGGACGCCCC CGTCGTCGAA
CTGTTCCAGC GGGTGGCTGC CTGCGACAGC CCGCTCGCCG TGGTCGACAA GGAAGACCGA
GTCATCGGCG CGGTGTCGCC CACCACGATC CTGTCCGCGC TCGCGATGCC GAAGGAGGCG
AGCAGCGCTG TGCCCAGCCT GGCGAACGGT ACTCGACGTG AAGGGGCTGC CAAGTGA
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| Protein sequence | MPAVRANHLY KVFGKRASQA VALLSDGRHR DTIKDLNVTA AVIDVSFEVQ PGEIFVVMGL
SGSGKSTLIR MLNGLLPPTA GTVEIDGTDI TTLSRRALRA LRGEKISMVF QHFALLPHRT
VLENAAYGLE VRGVSRAERH ERAAHALDLV GLGDWKDHLP NQLSGGMQQR VGLARALTAD
TDIILMDEAF SALDPLIRRD MQTQLLQLQA ELGKTIVFIT HDLNEAMRLG NRICVLRDGR
VVQIGTPEEI LNHPADDYVA RFTEDVDRSR VLTAASVMEP APKAEAADWE RVAPDAPVVE
LFQRVAACDS PLAVVDKEDR VIGAVSPTTI LSALAMPKEA SSAVPSLANG TRREGAAK
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