Gene Tfu_2906 details

Gene Information

• Locus tag: Tfu_2906
• Symbol: ispF
• ID: 3581392
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: -
• Start bp: 3421460
• End bp: 3421924
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637686635
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_290962
• Protein GI: 72163305
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGGGCG TCGGAACAGA CGTTCACCCT TTCCAAACGG GACGTCCGCT TTTCCTCGCC 
GGTCTCGAAT GGCCTGACGA GGTGGGGCTG AGCGGGCATT CCGACGGTGA CGTCGCGGCT 
CATGCCGCCT GCGATGCCCT CTTCTCGGCG TGTGCTCTGG GCGACCTCGG TTCGCAGTTC 
GGCACCTCCG ACCCCCGCTG GCGCGGGGCG TCCGGAGTGG CGCTGCTGAC CGAGGCCGCC 
CAACGTGTTC GTGCGGCCGG TTATGAGATC GGCAATATCG CCATCCAGAT CATCGGCAAC 
CGGCCGAAGT TCGCGCCGCG CAGGCACGAG GCAGAGAAAG TGCTCAGCGC CGCGGTAGGC 
GCGCCCGTGT CCTGTGCTGC GACCACAACC GACGGCCTGG GTTTCACCGG TCGCGGCGAA 
GGGATTGCGG CGGTCGCTAC TGCATTGTGC GTGCGCGTGC GCTGA 

 

Protein sequence

MVGVGTDVHP FQTGRPLFLA GLEWPDEVGL SGHSDGDVAA HAACDALFSA CALGDLGSQF 
GTSDPRWRGA SGVALLTEAA QRVRAAGYEI GNIAIQIIGN RPKFAPRRHE AEKVLSAAVG 
APVSCAATTT DGLGFTGRGE GIAAVATALC VRVR