| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2903 |
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| Symbol | |
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| ID | 3581389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 3417823 |
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| End bp | 3419217 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637686632 |
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| Product | peptidase S13, D-Ala-D-Ala carboxypeptidase C |
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| Protein accession | YP_290959 |
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| Protein GI | 72163302 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGGAACG ATCGACTCTG GGCTCTCCTC ACCTTGGCCT TGCTCACCCT ATTTGTGCTG
ACCACCGGCC TGGTCGCCCG CGACGTCATC GCCGCGCGCC CACCCGAGAC CGTGCCTGTT
CCCGTCGCGG TCGCAGAGGC GGTGCCTCTT CCGGACGCCG CGAATGCCGA GACCGTGGAT
CCGGCCCGAC TCGCGGATAA GCTTGATGAT CCCATGTCGC AGTCGGGCAT CGGTGAGGGG
CTCTCCGCAT ATGTCATCGA CGCCGAGACC CACCAGGAAC TCTACGCCCG CGATGCCGAC
GAAGGACTGG TGCCCGCCTC CACCACGAAA GTCGTCACCT CGGTGGCGGC GCTGCACGTG
CTCGGCCCGG ACGCGCAGAT CCACACGGAC GTCGTCCAGG GGGCTTCGCC GGAAGAGATC
GTTCTGGTCG GCGGCGGCGA CCCCACTTTG ACCGAGAACG CCGACCCGCA CCGCTACCCC
CGGCTGGCCA GTCTCGAAGA GCTCGCCGAG CAGACCGCGG CGGCCCTGTC GGAGGCGGGG
GTGACCGCGG TGCGGCTGGG CTATGACACG TCGGCTTATG CGGGTGAGCC GCTCGGCCCG
GGCTGGAAGC AGGGCTACAT CGACGAGGGC AGCACCGCAT CGGTGCACGC CCTGATGGTG
GACTGCGGGT TGGCCCGGGT CATCGACGAG TGCGGGCGGA TCGACATCCC CGTGGAGAGC
AAGTACGGTC CGCGGGTGGC TGATCCGCCG TTGGCGGCGG CGGAAGCGTT CGCCCGCAAA
CTGGATGAGG CCGGAATCAG TGTGCTGGAA ACCCCGCAGC CGACCCAGGC GCCTGCGGGC
GCGGAACTGC TGGCCCGGGT GTCGTCTCCA CCGATTTCCG CGCTGGTGGA GAAGACCCTG
ATGGACAGTG ACAACAATGT CGCGGAGGCG CTGGCCCGCC AGGTGGCGAT CGCGCAGGGG
GAGGAGCCCA GTTTTGCGGG CGCGGCCCGA GCAGTGATGG CGGTGATGGA CGAGCTGGGT
GTGGCGGGTG TGCAGGTCAG TGACGGCAGC GGCCTGTCGG TGGACACCCG GATCACTAGC
AAGGCGTTGG CGACGCTTCT GGTGTTGGCC GCTGATCCGG AGCGGCCCGA GCTCTACCCG
GTCCTTTCCG GGTTGCCGAC CGCGCACAGC ACGGGAAGTC TGAGCGCCCG GTACGCGCCG
GAGAGCGATG CGGCCTCAGG TGCGGGGCTG GTCCGCGCCA AGACTGGAAC TCTCAACGGG
GTCAGTTCGC TGGCGGGAAC CATTTACACC GCTCAAGGCC GTCTCCTGGT GTTCGCGTTT
GTCGCAAACC ATCCGAGCGC GACGGGGGCA GCCCTTGACC GTCTTGCCGC GGCCGTCGCG
GAATGCGGGT GTTGA
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| Protein sequence | MRNDRLWALL TLALLTLFVL TTGLVARDVI AARPPETVPV PVAVAEAVPL PDAANAETVD
PARLADKLDD PMSQSGIGEG LSAYVIDAET HQELYARDAD EGLVPASTTK VVTSVAALHV
LGPDAQIHTD VVQGASPEEI VLVGGGDPTL TENADPHRYP RLASLEELAE QTAAALSEAG
VTAVRLGYDT SAYAGEPLGP GWKQGYIDEG STASVHALMV DCGLARVIDE CGRIDIPVES
KYGPRVADPP LAAAEAFARK LDEAGISVLE TPQPTQAPAG AELLARVSSP PISALVEKTL
MDSDNNVAEA LARQVAIAQG EEPSFAGAAR AVMAVMDELG VAGVQVSDGS GLSVDTRITS
KALATLLVLA ADPERPELYP VLSGLPTAHS TGSLSARYAP ESDAASGAGL VRAKTGTLNG
VSSLAGTIYT AQGRLLVFAF VANHPSATGA ALDRLAAAVA ECGC
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