| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2879 |
|---|
| Symbol | |
|---|
| ID | 3581784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 3393189 |
|---|
| End bp | 3393764 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637686608 |
|---|
| Product | N-acetylglutamate synthase |
|---|
| Protein accession | YP_290935 |
|---|
| Protein GI | 72163278 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1246] N-acetylglutamate synthase and related acetyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.00976241 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAATAG AAGAAGCGAT CACCGTCCGC CGGGCACGCA CCCGCGACGT CGTCCACATC
CGCAGACTCA TCGACCTCTT CAGTGGGGAA GGCCGCATCC TCACTAAGAG CACGGTCACT
CTGTACGAGG ACATCCAAGA GTTCTGGGTG GGCGAACTCG ACGACGGAAC AAGCAAGCGG
GTCGTGGGGT GCGGGGCGCT TCACGTGCTG TGGGAAGACC TCGCCGAGGT CCGCACAGTC
GCCGTCGACC CGGAGGTCCA GGGCCGCGGG GTGGGGCACC GCATCGTCTC CGCGCTGCTG
GACACCGCGC GAGAACTCGG TGTGCGCCGG GTCTTCTGCC TGACCTTCGA AACCGCGTTC
TTCGCCAAAC ACGGTTTCGT GGAGATCAAA GGCACCCCGG TCTCCGACGA GGTCTATCAG
GAACTCTTGC GCTCCTACGA CGAGGGGGTC GCGGAATTCC TCGACCTGGA CCGGGTCAAA
CCCAACACCC TCGGCAACGT CCGCATGCTG CTGCACCTGG ACTCCGACCC GGCCCAGGAC
TCCGCGAACG GCTCCTCGGC CCGCCCCGGG GCCTAG
|
|---|
| Protein sequence | MTIEEAITVR RARTRDVVHI RRLIDLFSGE GRILTKSTVT LYEDIQEFWV GELDDGTSKR
VVGCGALHVL WEDLAEVRTV AVDPEVQGRG VGHRIVSALL DTARELGVRR VFCLTFETAF
FAKHGFVEIK GTPVSDEVYQ ELLRSYDEGV AEFLDLDRVK PNTLGNVRML LHLDSDPAQD
SANGSSARPG A
|
|---|
| |