Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2870 |
Symbol | |
ID | 3581775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 3379051 |
End bp | 3380460 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637686599 |
Product | putative integral membrane protein |
Protein accession | YP_290926 |
Protein GI | 72163269 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCACAC AGGAGCACGC CCCGCCCTCC TCCGGGGAAC CAGTCACTGC TCCCACACAG CACCGAAGCG CCCCGTCACT CTGGCCGCCG CTGCGCGCCC TCGCCTTGCG CCTGCACTTC TATGCGGGAG TCCTCGTCGC ACCATTCATC GCGGTCGCAG CGATCACCGG GCTTCTCTAC GCCTACACCC CGCAACTCGA ACAATGGCTC TACGCTGACC AGTTGCGCGT TGAACAACAA GGGCATCGGA TTCCGCTCAG CCTGCAAGTC GAAGCAGCCC AAGAAGCCCA CCCGGAAGGC ACCCTCCACG CGATCCGTAT CGGCGGCCCC GAAGACAGCA CCCGAGTCCT CTTCCAGGTC GACGGGCTGG AAGAAAGCGT CCGTTCCAGC GTCTTCGTCG ACCCCTACAC CGGGGAAGTC CTCGGCACCC TCGAGGTCTA CGGCAACAGC GGCGCCCTCC CGGTACGCAC CTGGATCAGC ATGCTCCACC GCCATCTCCA CTTGGGCGAG GTCGGCCGCC TCTACAGCGA ACTCGCGGCA AGCTGGCTGT GGGTGGTCGC CCTCGGGGGC GTTGTCCTGT GGGTGAGCCG CGGCCGCACC GGCTCGTGGA TCCGCCGCGT CTTCCTGCCT GACCAGGGCG CCACCGGGCG GCGCAACACC ATGTCCTGGC ACGGCACCGT GGGCGTGTGG ATGCTCCTCG GAGTGCTCGC GCTCTCCGCA ACCGGCATGA CCTGGTCAGC CTATGCCGGG CAGAACATCG GAACCATCCG CCAAGCCTTG AACTGGCAGA CCCCTTCCCT GAACTCGGAG GTTTTCGAAG CAGGACACCA CGACACGGGC GGCACAACCG CAGAACACGG CCACGAGCAC CACGTCGCGG TCAGCGTCGA CCAAGTCGTC GGCGCGGTAC GCGAAGCCGG GATCGACGGC CCCATCGAAG TGATCTACCC GGCTTCCGAA ACCCAGGCGT TCAAAGTCGT CGAAACCGGC AGGGAATGGC CGGTCCAACA GGACTCGGCG CTCGTCGACC CCATGACCGG GGAAGTCATC GACATCCTGC GGTTCGAGGA CTACCCGCTG ATGGCCAAGC TCACCGTGTG GGGCATTGCC GCGCACATGG GCCTGCTGTT CGGGCTCCCC AACCAGCTTG TGTTGACCGC GCTGGCCGTG GGCATCCTGG CTCTCATCAT CTGGGGATAC CGCATGTGGT GGCAGCGCCG CCCCACCACC CGGGAAGGAT TCGCCCTAGG TCGCCCGTTC CCACGTGGGA GCTGGCGACG GCTGCCCCTG TGGGCGAAGG TCGCACTCGT CGCGGTGCTC GTCGGACTGG GCTGGCTGAT GCCGGTCTGG ACGGTTTCCC TCGTGGGATT CCTTGTCATG GACGCGGTCA TCGCCCGAAC GAGCACGTAA
|
Protein sequence | MSTQEHAPPS SGEPVTAPTQ HRSAPSLWPP LRALALRLHF YAGVLVAPFI AVAAITGLLY AYTPQLEQWL YADQLRVEQQ GHRIPLSLQV EAAQEAHPEG TLHAIRIGGP EDSTRVLFQV DGLEESVRSS VFVDPYTGEV LGTLEVYGNS GALPVRTWIS MLHRHLHLGE VGRLYSELAA SWLWVVALGG VVLWVSRGRT GSWIRRVFLP DQGATGRRNT MSWHGTVGVW MLLGVLALSA TGMTWSAYAG QNIGTIRQAL NWQTPSLNSE VFEAGHHDTG GTTAEHGHEH HVAVSVDQVV GAVREAGIDG PIEVIYPASE TQAFKVVETG REWPVQQDSA LVDPMTGEVI DILRFEDYPL MAKLTVWGIA AHMGLLFGLP NQLVLTALAV GILALIIWGY RMWWQRRPTT REGFALGRPF PRGSWRRLPL WAKVALVAVL VGLGWLMPVW TVSLVGFLVM DAVIARTST
|
| |