| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2865 |
|---|
| Symbol | |
|---|
| ID | 3581158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 3371126 |
|---|
| End bp | 3371893 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637686593 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_290921 |
|---|
| Protein GI | 72163264 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG4767] Glycopeptide antibiotics resistance protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTGGTGG CTCGATGGAA CCGCCGCTCA CCGCGGTTGT TCCCAAGGGA AGCCCGATGG
CTTCTGGGCA CGGCCGCAGC GGTGTACCTG CTCATTCTGG GCGGTCCCTT GCTGGGGTGG
GACAAGGTCG GCACCACCGG TTGGGGCATA ACGTGGAATC CGCTGTCGGC CTATGAGGAA
CTGCGCCAGA GAACCCTTGC TTCAGAGGGC GCCTACCTGG CACTGGGACC TAGCGCGGAA
GAAACCGTTT ACTACGGGGC ACGAGAACTA TCCCCTGAAG AATTGGAACA GGCGCGTCGG
GAAGTCGATC CAGGCGACGC AGCCTACTAC CGTTATCCCA CTACCGACGG CCGCATCGTA
TGGATCGACG CCTACGGCCA CGACGTGGAC CTCGACAAAC GCGCGGAACT TGAGGCTGTC
CCGCCACCTC CTGTCCGCAC CGAGCCGTCA GCAGGCCTCA TTGTGGAGGA GAAGATCGTC
AACGCCCTGC TCTTCGTGCC CATCGGCATT TTGGCTTTCG CTGCTTTCTC CTCCTGGTGG
GCGCGCCTAA CCACAGGACC AGGGCTGTCA CTGGCCATAG AGACAGTCCA GTGGGCAATG
GCTGCTGGCC GTACCGCAGA CACCGGTGAC CTACTCGTCA ACACTGTGGG CTCCGCGATA
GGGGTGGCCA TGACCGCGTT CGCCTCGCTG TGCCTCGGCT TCTTCCATCG CGAGGGCGCA
CGGCACCACA GCCCTGTCAT CGCGGGAGAG GACAGCCTTC CCGTTTGA
|
|---|
| Protein sequence | MVVARWNRRS PRLFPREARW LLGTAAAVYL LILGGPLLGW DKVGTTGWGI TWNPLSAYEE
LRQRTLASEG AYLALGPSAE ETVYYGAREL SPEELEQARR EVDPGDAAYY RYPTTDGRIV
WIDAYGHDVD LDKRAELEAV PPPPVRTEPS AGLIVEEKIV NALLFVPIGI LAFAAFSSWW
ARLTTGPGLS LAIETVQWAM AAGRTADTGD LLVNTVGSAI GVAMTAFASL CLGFFHREGA
RHHSPVIAGE DSLPV
|
|---|
| |