| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2843 |
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| Symbol | |
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| ID | 3580313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 3342082 |
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| End bp | 3344805 |
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| Gene Length | 2724 bp |
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| Protein Length | 907 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637686568 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_290899 |
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| Protein GI | 72163242 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGACA CCGGGTCCAC ACCGAACCCT ACCCCAGCCC ATATCAAAAT TATAAAGGCC
CAGGCTGGCA ACAACGTTAT TGGCCAACAG ATCACAAAAG AGAACAATTT TCACTTTTAT
CTCCATCGGT CCCGCCCCAC CGCGAAGTTC TCCCTCCCCG CCCCTCCCCC GGCCCTGGTA
GGCCGCCAGC ACGAAGTGGA CACTCTGCTG AGCTGGCTTG ACCCCACCGC TTCTCACCAG
GAGGAGGACG AAACGTCCTC AAGCGTCGTG GTGTCCGCGC TGGCGGGCAT GGGAGGAGTG
GGTAAAACCG CTCTGGTCGC CTCCGCAGGA CGGATAGCCC ACCAGCGTGA ATGGTTCTGC
GCGGAACTGT TCGTGGACCT ACGCGGCTAC ACCCCCGGCG CCGTACCCCT GTCCGCAGAC
GCAGCCTTAG ACGTGCTGCT GCGCCAAATG GGTATCGCCC CCGAGGAGAT CCCCGCGGAG
CTTGAGGAGC GCGCCGCGTT CTACCGGTCA GCTCTGACGG AACTGTCCCG CAACGACCCG
CGCGGCCGAC CGGTGCTGGT GGTGGTAGAT AACGCTCAGA GCGCCGAGCA GGTGCGCCCC
CTGCTTCCCG GTCCCGGCAA TCACCGGCTG GTAGCCACGA GCCGCAGCAG CCTGCACTCT
TTGACCGGTG CCCACCACAT TGACCTGGAC GTTCTCACCG CCGATGCGGC CGTGGAACTG
GTGGCCAGCA TCCTCAAGGA AGACGATGCG CGCACCCGCG ACACTGAGGG CTTGCGGCAA
CTAGCTGAGG TGTGCGGCTA TCTGCCGTTG GCGTTGGAGA TCGTTGCCGC ACAACTCGCT
CGTACTCCCC AACTCACCCC TGCCCGCCTG GTGCAACGGC TCAAAAAAGC GGCCTCGCGA
GTGGACAAGA TCCACGACCT CAGCCGAGAC GCGAGTCAAA CACGGATTCT CCGAGCGGTC
TTCGACACCT CCCTCGCACA ACTGACCGAC GACGAAGCAC GAGTTTTCCT TCTTACGGCT
TCCAGCCCAG GCCCGACTAT TTCCACGTCC GCCGCCGCGG TACTCACCGG CCTTGACGAA
GACGCCGTGG AAGAAGTGCT TGAAGAACTG GTGGCCGTGC ACCTGGTCCA ACACGCCAGC
GAGGACCGGT GGGGAGCGCA TGACCTGCTC ATCGACTACG CTGCCAGCCA CCCCCAACCG
CCTGCCGACC GCGACCAGGC TCTTACCCGA CTGTTGGACT ACTACGTGAC CACGGCTCAC
GCTGCGGACA CCCATTTGAA AGCCCCACCC AGTCAAGAGG TTTCCAACCG GTTCGCCCGC
CGGGAGGAGG CGCTGGCCTG GCTGGACAAC GAGCAGGCCA CTCTGGTAGC TGCCGCGCTC
GCTGCCCCCA CCCTCGACCA CACCGACGCA GCGGTTCTTC TCCCCCTGCT CTTGACCAAG
TACCTGGACC TCAGGCGTCG TTTCGGGGAG TTGGAACAGG TTTCCCGCTC TGCTCAAGCT
GTTGCGCACG CCACCGACAA CCCGAACGCA GAAGCGCAGG CATGGCTCGC TCTCGGCCTT
GCCTTGGTAG GCATGCGCCG CCCCGAGGAG GGCGGCGCAG CGTTCACTCG TGCCCGCGAC
CTGTTCCGCC AAACCGGGAA CACCCTTGGC GAAGTGGAAG CGTTGACCGG GCTTGGTGGA
GCACGGCAGC AAGCGCGTCA GCTCGACGAC GCTCTTGAGG CGTTCACGAA CGCCTCCAAC
CTGCTGGGGC GTATCACAGA TCCTCGCAGC GGGGTGCCGG CGCTCACCGG TGTCGGTCTC
GCGCTCCAGA GTATGGGCCG CTTTAAGGAA GCCCTCGACG CTTTAGACCG CGCCCATGCT
CTGCTCGAGC AGACCGCAGA CCCTTACGGG GAAGCGCAAG TATTGTCCTG CCGTGGCCTC
ACCCTGCTCG GTATGAGCCG GTTTGAGCAC GCCATCAAGT CGCTCACCCG CGCCCAAGAG
CTGTTTCAGC GCACCGGGGA CGCACACGCC GAGGCACAGA CATGGGTGCT CCTCGGCACA
GCGCTCAACC AAGCGAACCG GCCGAAGGAG GCTATCGACG CTTTCACCCA CGCTCGAGAG
CTGTTCCAGC GCACCGAGGA CACCCAAGGC GAAGCACAGG CATGGGCTGG CCTCGCGGAG
GCACTGCGGA AAACAGGACA GACGGAAGAA GCCGTCAAGG CCGCCGACCA TGTCCGTGAC
TTGCTAGGGC AGGAAGAAGG CGCCGCCCTT GGAGCACCGG AGCTGGCTGC CCTTGGCATG
TCCCAGCTTG CTTCAGGTGA GTTTACGGAA GCCGTCGACA CGCTCACTCG CGCCCGCACG
CTGTTCCGCC AAACCACGGA CGCCCGTGGT GAAGCGGAAG CGTGTGCTGG CCTCGGCACA
GCGCTGATTG GTGCGGGTCG GGGTGAGGCC GCTGCCGAGG CTTTCACCCG CGCCCAAGAA
CTGTTCCAGC AGGCCGGGGA CATCCAGAGT GAAGCGCAGG CCTGGAGTGG TCTTGCCGCA
GCGCTCGGCC AAGCGAATCG GCCTGAAGAA GCCCTCAAGG CTGTCACCCG CGCCCAAGAA
CTGTTCCAGC AGATCGGAGA CACCAAGGGT GAAGCGGAAG CATGGGCCGG GATGGGGCTG
ACTCTGTTGG GATCCGGGCG CATCATCAAG GCGCTGAAAG CGTTCGTGCG GGCGCGCCAA
CTGCGCCGCC AGAGCCAGAA ATAG
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| Protein sequence | MSDTGSTPNP TPAHIKIIKA QAGNNVIGQQ ITKENNFHFY LHRSRPTAKF SLPAPPPALV
GRQHEVDTLL SWLDPTASHQ EEDETSSSVV VSALAGMGGV GKTALVASAG RIAHQREWFC
AELFVDLRGY TPGAVPLSAD AALDVLLRQM GIAPEEIPAE LEERAAFYRS ALTELSRNDP
RGRPVLVVVD NAQSAEQVRP LLPGPGNHRL VATSRSSLHS LTGAHHIDLD VLTADAAVEL
VASILKEDDA RTRDTEGLRQ LAEVCGYLPL ALEIVAAQLA RTPQLTPARL VQRLKKAASR
VDKIHDLSRD ASQTRILRAV FDTSLAQLTD DEARVFLLTA SSPGPTISTS AAAVLTGLDE
DAVEEVLEEL VAVHLVQHAS EDRWGAHDLL IDYAASHPQP PADRDQALTR LLDYYVTTAH
AADTHLKAPP SQEVSNRFAR REEALAWLDN EQATLVAAAL AAPTLDHTDA AVLLPLLLTK
YLDLRRRFGE LEQVSRSAQA VAHATDNPNA EAQAWLALGL ALVGMRRPEE GGAAFTRARD
LFRQTGNTLG EVEALTGLGG ARQQARQLDD ALEAFTNASN LLGRITDPRS GVPALTGVGL
ALQSMGRFKE ALDALDRAHA LLEQTADPYG EAQVLSCRGL TLLGMSRFEH AIKSLTRAQE
LFQRTGDAHA EAQTWVLLGT ALNQANRPKE AIDAFTHARE LFQRTEDTQG EAQAWAGLAE
ALRKTGQTEE AVKAADHVRD LLGQEEGAAL GAPELAALGM SQLASGEFTE AVDTLTRART
LFRQTTDARG EAEACAGLGT ALIGAGRGEA AAEAFTRAQE LFQQAGDIQS EAQAWSGLAA
ALGQANRPEE ALKAVTRAQE LFQQIGDTKG EAEAWAGMGL TLLGSGRIIK ALKAFVRARQ
LRRQSQK
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