Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2843 |
Symbol | |
ID | 3580313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 3342082 |
End bp | 3344805 |
Gene Length | 2724 bp |
Protein Length | 907 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637686568 |
Product | TPR repeat-containing protein |
Protein accession | YP_290899 |
Protein GI | 72163242 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGACA CCGGGTCCAC ACCGAACCCT ACCCCAGCCC ATATCAAAAT TATAAAGGCC CAGGCTGGCA ACAACGTTAT TGGCCAACAG ATCACAAAAG AGAACAATTT TCACTTTTAT CTCCATCGGT CCCGCCCCAC CGCGAAGTTC TCCCTCCCCG CCCCTCCCCC GGCCCTGGTA GGCCGCCAGC ACGAAGTGGA CACTCTGCTG AGCTGGCTTG ACCCCACCGC TTCTCACCAG GAGGAGGACG AAACGTCCTC AAGCGTCGTG GTGTCCGCGC TGGCGGGCAT GGGAGGAGTG GGTAAAACCG CTCTGGTCGC CTCCGCAGGA CGGATAGCCC ACCAGCGTGA ATGGTTCTGC GCGGAACTGT TCGTGGACCT ACGCGGCTAC ACCCCCGGCG CCGTACCCCT GTCCGCAGAC GCAGCCTTAG ACGTGCTGCT GCGCCAAATG GGTATCGCCC CCGAGGAGAT CCCCGCGGAG CTTGAGGAGC GCGCCGCGTT CTACCGGTCA GCTCTGACGG AACTGTCCCG CAACGACCCG CGCGGCCGAC CGGTGCTGGT GGTGGTAGAT AACGCTCAGA GCGCCGAGCA GGTGCGCCCC CTGCTTCCCG GTCCCGGCAA TCACCGGCTG GTAGCCACGA GCCGCAGCAG CCTGCACTCT TTGACCGGTG CCCACCACAT TGACCTGGAC GTTCTCACCG CCGATGCGGC CGTGGAACTG GTGGCCAGCA TCCTCAAGGA AGACGATGCG CGCACCCGCG ACACTGAGGG CTTGCGGCAA CTAGCTGAGG TGTGCGGCTA TCTGCCGTTG GCGTTGGAGA TCGTTGCCGC ACAACTCGCT CGTACTCCCC AACTCACCCC TGCCCGCCTG GTGCAACGGC TCAAAAAAGC GGCCTCGCGA GTGGACAAGA TCCACGACCT CAGCCGAGAC GCGAGTCAAA CACGGATTCT CCGAGCGGTC TTCGACACCT CCCTCGCACA ACTGACCGAC GACGAAGCAC GAGTTTTCCT TCTTACGGCT TCCAGCCCAG GCCCGACTAT TTCCACGTCC GCCGCCGCGG TACTCACCGG CCTTGACGAA GACGCCGTGG AAGAAGTGCT TGAAGAACTG GTGGCCGTGC ACCTGGTCCA ACACGCCAGC GAGGACCGGT GGGGAGCGCA TGACCTGCTC ATCGACTACG CTGCCAGCCA CCCCCAACCG CCTGCCGACC GCGACCAGGC TCTTACCCGA CTGTTGGACT ACTACGTGAC CACGGCTCAC GCTGCGGACA CCCATTTGAA AGCCCCACCC AGTCAAGAGG TTTCCAACCG GTTCGCCCGC CGGGAGGAGG CGCTGGCCTG GCTGGACAAC GAGCAGGCCA CTCTGGTAGC TGCCGCGCTC GCTGCCCCCA CCCTCGACCA CACCGACGCA GCGGTTCTTC TCCCCCTGCT CTTGACCAAG TACCTGGACC TCAGGCGTCG TTTCGGGGAG TTGGAACAGG TTTCCCGCTC TGCTCAAGCT GTTGCGCACG CCACCGACAA CCCGAACGCA GAAGCGCAGG CATGGCTCGC TCTCGGCCTT GCCTTGGTAG GCATGCGCCG CCCCGAGGAG GGCGGCGCAG CGTTCACTCG TGCCCGCGAC CTGTTCCGCC AAACCGGGAA CACCCTTGGC GAAGTGGAAG CGTTGACCGG GCTTGGTGGA GCACGGCAGC AAGCGCGTCA GCTCGACGAC GCTCTTGAGG CGTTCACGAA CGCCTCCAAC CTGCTGGGGC GTATCACAGA TCCTCGCAGC GGGGTGCCGG CGCTCACCGG TGTCGGTCTC GCGCTCCAGA GTATGGGCCG CTTTAAGGAA GCCCTCGACG CTTTAGACCG CGCCCATGCT CTGCTCGAGC AGACCGCAGA CCCTTACGGG GAAGCGCAAG TATTGTCCTG CCGTGGCCTC ACCCTGCTCG GTATGAGCCG GTTTGAGCAC GCCATCAAGT CGCTCACCCG CGCCCAAGAG CTGTTTCAGC GCACCGGGGA CGCACACGCC GAGGCACAGA CATGGGTGCT CCTCGGCACA GCGCTCAACC AAGCGAACCG GCCGAAGGAG GCTATCGACG CTTTCACCCA CGCTCGAGAG CTGTTCCAGC GCACCGAGGA CACCCAAGGC GAAGCACAGG CATGGGCTGG CCTCGCGGAG GCACTGCGGA AAACAGGACA GACGGAAGAA GCCGTCAAGG CCGCCGACCA TGTCCGTGAC TTGCTAGGGC AGGAAGAAGG CGCCGCCCTT GGAGCACCGG AGCTGGCTGC CCTTGGCATG TCCCAGCTTG CTTCAGGTGA GTTTACGGAA GCCGTCGACA CGCTCACTCG CGCCCGCACG CTGTTCCGCC AAACCACGGA CGCCCGTGGT GAAGCGGAAG CGTGTGCTGG CCTCGGCACA GCGCTGATTG GTGCGGGTCG GGGTGAGGCC GCTGCCGAGG CTTTCACCCG CGCCCAAGAA CTGTTCCAGC AGGCCGGGGA CATCCAGAGT GAAGCGCAGG CCTGGAGTGG TCTTGCCGCA GCGCTCGGCC AAGCGAATCG GCCTGAAGAA GCCCTCAAGG CTGTCACCCG CGCCCAAGAA CTGTTCCAGC AGATCGGAGA CACCAAGGGT GAAGCGGAAG CATGGGCCGG GATGGGGCTG ACTCTGTTGG GATCCGGGCG CATCATCAAG GCGCTGAAAG CGTTCGTGCG GGCGCGCCAA CTGCGCCGCC AGAGCCAGAA ATAG
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Protein sequence | MSDTGSTPNP TPAHIKIIKA QAGNNVIGQQ ITKENNFHFY LHRSRPTAKF SLPAPPPALV GRQHEVDTLL SWLDPTASHQ EEDETSSSVV VSALAGMGGV GKTALVASAG RIAHQREWFC AELFVDLRGY TPGAVPLSAD AALDVLLRQM GIAPEEIPAE LEERAAFYRS ALTELSRNDP RGRPVLVVVD NAQSAEQVRP LLPGPGNHRL VATSRSSLHS LTGAHHIDLD VLTADAAVEL VASILKEDDA RTRDTEGLRQ LAEVCGYLPL ALEIVAAQLA RTPQLTPARL VQRLKKAASR VDKIHDLSRD ASQTRILRAV FDTSLAQLTD DEARVFLLTA SSPGPTISTS AAAVLTGLDE DAVEEVLEEL VAVHLVQHAS EDRWGAHDLL IDYAASHPQP PADRDQALTR LLDYYVTTAH AADTHLKAPP SQEVSNRFAR REEALAWLDN EQATLVAAAL AAPTLDHTDA AVLLPLLLTK YLDLRRRFGE LEQVSRSAQA VAHATDNPNA EAQAWLALGL ALVGMRRPEE GGAAFTRARD LFRQTGNTLG EVEALTGLGG ARQQARQLDD ALEAFTNASN LLGRITDPRS GVPALTGVGL ALQSMGRFKE ALDALDRAHA LLEQTADPYG EAQVLSCRGL TLLGMSRFEH AIKSLTRAQE LFQRTGDAHA EAQTWVLLGT ALNQANRPKE AIDAFTHARE LFQRTEDTQG EAQAWAGLAE ALRKTGQTEE AVKAADHVRD LLGQEEGAAL GAPELAALGM SQLASGEFTE AVDTLTRART LFRQTTDARG EAEACAGLGT ALIGAGRGEA AAEAFTRAQE LFQQAGDIQS EAQAWSGLAA ALGQANRPEE ALKAVTRAQE LFQQIGDTKG EAEAWAGMGL TLLGSGRIIK ALKAFVRARQ LRRQSQK
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