| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2797 |
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| Symbol | |
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| ID | 3581334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 3284271 |
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| End bp | 3285530 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637686522 |
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| Product | d-amino-acid dehydrogenase |
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| Protein accession | YP_290853 |
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| Protein GI | 72163196 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.337327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAGA CACGAGACGG AGGCGCACCG CGCACCGCGG TGGTCATTGG GGCCGGAATG
GTCGGCCTGT CGACCGCCTG GTTCCTGCAG GAGCGGGGCG TGGACGTGAC CGTGGTCGAC
CGGGACAGCG TGGCGGCAGG CGCGTCATGG GGCAACGCGG GATGGATCTC CCCGGGACTG
TCGATCCCGC TGCCTGAACC GTCCGTCCTG CGCTACGGAC TGCGGTCGCT GCTGGACCGC
AATGCCCCCC TCTACGTTCC GATCCGTGTC GACGTGGGCT TGTGGGGATT CCTGCTGCGG
TTCGCCGCCC ACTGCACCAT GCGGGCGTGG CGCCGGTCCA TGCAAGGGTT CATCCCCATC
AACTCGCAGT GTTTGGACGC CTACGACCAG TTGGCGGAGA ACGACATCAC CGTGCCGACA
GTGGACGCGC CGATCACCGC GGCCTTCGAA AAACGCGCCC AAGCCGCGGA CCTGCTGCGG
GAGCTGCGGC TGATCCGCGA CTCCGGCCAG GAGATCGGTT TCGCCGAGAT GACCGGGGAC
GAGCTGCGGG AGCGGATGCC GCAAGTGTCG CAGCGGGTGG AACTCGCGAT CCGATTGGAC
GGGCAGCGCT ACGTGGACCC GGGAGCGTAC ACGAAGGCGC TCGGCGAAGC CGTGGTGAAA
CGCGGCGGCA CCCTCCGCGA AGGGTTCACC GTCACCGACA TCCGGCCGGA CTCCGGGGCG
ATCGCGGTCC GCTCGACGAC AGGGGAGAGC GTGCGCGGCG ACGTGGTGGT GCTGGCCGCC
GGATCGTGGA TCACCGGGCT CGCCCGCAAA CTGGGGGTCC GCACCCGCGT GCAGGCGGGA
CGCGGATACT CGTTCACCGT GCCCACCGAG CAACCCGTGC CCGGCCCCCT GTACCTGCCC
GCCGTGCGCG TAGCCTGCAC CCCCTACCAG GGCAAACTGC GGGTCGCGGG CACGATGGAG
TTCCGCGGGC CTGACGACCC TCTGGACCCG GGGCGGATCC GCGCGATCAT CGCCTCGGCA
CGCCCGCTCA TGGAAGGGAT CTCCTGGGAG GACCGCACCG ACGAATGGGT CGGCCCGCGC
CCGGTCACCC CGGACGGGCT GCCGTTGATC GGAGCGACGA AAGCACCAGG CGTCTACGTT
GCGGGAGGCC ACGGTATGTG GGGGCTGACC CTCGGCCCGA TCACCGGCCG TCTCCTCGCC
GAACAGATCA CCACCGGAAA GCGGCCGGAA GCACTGGCCG CATTCGACCC GCTGCGCTAA
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| Protein sequence | MNQTRDGGAP RTAVVIGAGM VGLSTAWFLQ ERGVDVTVVD RDSVAAGASW GNAGWISPGL
SIPLPEPSVL RYGLRSLLDR NAPLYVPIRV DVGLWGFLLR FAAHCTMRAW RRSMQGFIPI
NSQCLDAYDQ LAENDITVPT VDAPITAAFE KRAQAADLLR ELRLIRDSGQ EIGFAEMTGD
ELRERMPQVS QRVELAIRLD GQRYVDPGAY TKALGEAVVK RGGTLREGFT VTDIRPDSGA
IAVRSTTGES VRGDVVVLAA GSWITGLARK LGVRTRVQAG RGYSFTVPTE QPVPGPLYLP
AVRVACTPYQ GKLRVAGTME FRGPDDPLDP GRIRAIIASA RPLMEGISWE DRTDEWVGPR
PVTPDGLPLI GATKAPGVYV AGGHGMWGLT LGPITGRLLA EQITTGKRPE ALAAFDPLR
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