| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2791 |
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| Symbol | |
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| ID | 3581328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 3276895 |
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| End bp | 3278094 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637686516 |
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| Product | xylanase |
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| Protein accession | YP_290847 |
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| Protein GI | 72163190 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCGG TGCGTCTCAT CACCGCCGCG CTCACTACTG CGGTGCTGTC TCTCCCCCTC
ATGGTGGTTC CCGCTAGCGC GGGACCGGTC CACGACCATC ATCCCGCTCC CCACTCCAAC
GCGAAATCCG AGCGGCTGCG CTGGGCTGCC CCCGACGGCT TCTACATCGG CAGCGCGGTC
GCGGGCGGCG GCCACCACCT GGAGCAGGAC TACCCCGACC CCTTCACCCA CGACGGGAAA
TACCGCAGCA TCCTGGCTCA GCAGTTCAGC TCAGTCTCCC CGGAAAACCA GATGAAGTGG
GAGTACATCC ATCCTGAGCC GGACCGCTAC GACTTCGCCA TGGCCGACAA GATCGTCGAC
TTCGCGGAGC GTAACGACCA GAAGGTCCGC GGTCACACCC TGCTGTGGCA CAGCCAGAAC
CCCGAGTGGC TCGAAGAGGG CGACTACTCC CCTGAGGAGC TGCGCGAGAT CCTGCGGGAC
CACATCACCA CCGTGGTCGG CCGCTACGCC GGACGGATCC ACCAGTGGGA TGTGGCCAAC
GAGATCTTCG ACGAGCAGGG CAACCTGCGT ACTCAGGAGA ACATCTGGAT CCGCGAGCTC
GGCCCCGGCA TCATCGCTGA CGCGTTCCGC TGGGCGCACG AGGCAGACCC GAACGCGGAG
CTGTTCTTCA ACGACTACAA CGTGGAGGGC ATCAACCCGA AGAGCGACGC CTACTACGAA
CTCATCCAGG AGCTGCTCGA CGACGGGGTT CCGGTCCACG GCTTCTCCGT CCAGGGGCAC
CTGAGCACCC GCTACGGCTT CCCGGGCGAC CTGGAACAGA ACCTGCGCCG GTTCGACGAG
CTCGGTCTGG CCACGGCGAT CACCGAGCTG GACGTGCGCA TGGACCTGCC GGCCAGCGGC
AAGCCGACCC CGAAGCAGTT GGAGCAGCAG GCCGACTACT ACCAGCAGGC GCTTGAAGCG
TGCCTGGCCG TGGAAGGCTG CGACTCCTTC ACGATCTGGG GCTTCACGGA CAAGTACTCC
TGGGTGCCGG TGTTCTTCCC CGACGAGGGC GCGGCGACGA TCATGACGGA GAAGTACGAG
CGCAAGCCCG CTTTCTTCGC GCTGCAGCAG ACGCTGCGGG AAGCCCGGTG CGCGGACAGC
CCCAAGCCGG GACCGGGCAA GCCGAAGCCG GGCAAGGGCC CCAAGCACGA TCACTGCTGA
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| Protein sequence | MKPVRLITAA LTTAVLSLPL MVVPASAGPV HDHHPAPHSN AKSERLRWAA PDGFYIGSAV
AGGGHHLEQD YPDPFTHDGK YRSILAQQFS SVSPENQMKW EYIHPEPDRY DFAMADKIVD
FAERNDQKVR GHTLLWHSQN PEWLEEGDYS PEELREILRD HITTVVGRYA GRIHQWDVAN
EIFDEQGNLR TQENIWIREL GPGIIADAFR WAHEADPNAE LFFNDYNVEG INPKSDAYYE
LIQELLDDGV PVHGFSVQGH LSTRYGFPGD LEQNLRRFDE LGLATAITEL DVRMDLPASG
KPTPKQLEQQ ADYYQQALEA CLAVEGCDSF TIWGFTDKYS WVPVFFPDEG AATIMTEKYE
RKPAFFALQQ TLREARCADS PKPGPGKPKP GKGPKHDHC
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