Gene Tfu_2788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_2788 
Symbol 
ID3581325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp3273536 
End bp3274630 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content68% 
IMG OID637686513 
Productcellulose-binding family II protein 
Protein accessionYP_290844 
Protein GI72163187 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase
[COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.700875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACCG TCCCCCGACG CTCCCCCTTA CGGAAACGTC TCCTGGTGGC CTTGTGCGCG 
CTAGGACTCG CCTTCACCTC CGCCGCCACA GCCCACGCCC AGGTGACTCC TGACATCGTC
ACCACCACCG GGCAGCCCGG AAGGACCGTC GCCCTCACCT TCGACGACGG CCCCAACCCG
AACGACACCC CGGCCCTCCT GTCGGTCCTG CGCAAACACC AGGTCAAAGC GGTGTTCTGC
CTGTGGGGCG AGCACGTCCG CCAATACCCG GCGATCGCCC GGCAGATCGC GGAGGAGGGG
CACATCCTGT GCAACCACTC GATGCGCCAC GACGACATGG GGAACTGGTC GGCAGCCCAG
ATCCGCGCCG ACTTGGAAGC CACCAACCAG GCCATCCGCG AGGCTGTCCC CAACGCTGAC
ATCCCGTACT TCCGGGCCCC GTACGGCTCG TGGGGACAGA GCCCGCAGGT CGCCGCTGAC
ATGGGCATGC AGCCGCTGGG CTGGGCCATG GACATCGCCG ACTGGGAGCC TCCCGGCACC
AGCGAACTGG TGCGGCGGCT CAACGAGCGG GTCACCCCGG GGGCGGTGAT TTTGCTCCAC
GACGGTGGAG GCGACCGTAG CCAGACCGTG CAAGCCGTGG ACCAGGTCAT CCCGCAGTGG
AAGGCGCAGG GCTGGACCTT CACCTTCCCC GCTGGCGCGC CCACGAACCC TGGCCCGACG
CCCACCCCGA CCCCGACGCC GACCCCCACT CCGACTCCCA CCCCTGGCCC TGGCAACCCG
GGAGCCACCT GTGACGTGGA CTACACCGTG GTCAATGACT GGGGTCACGG TATGCAGGGG
GCGATCACCG TCTCCAACAC CGGATCCTCG CCCATCAACA ACTGGACCCT GCAGTTCAGC
TTCTCGGGTG TGAACATCTC CAACGGCTGG AACGGCGAGT GGAGCCAGAG CGGCTCGCAG
ATCACCGTCC ACGCTCCTGC CTGGAACTCC ACGCTCCAGC CGGGCCAGAG CGTGGAACTG
GGCTTCGTTG CTGACAAGAC CGGCAACGTC TCCCCGCCCT CCCAGTTCAC CCTCAACGGA
GCCACCTGCT CCTGA
 
Protein sequence
MTTVPRRSPL RKRLLVALCA LGLAFTSAAT AHAQVTPDIV TTTGQPGRTV ALTFDDGPNP 
NDTPALLSVL RKHQVKAVFC LWGEHVRQYP AIARQIAEEG HILCNHSMRH DDMGNWSAAQ
IRADLEATNQ AIREAVPNAD IPYFRAPYGS WGQSPQVAAD MGMQPLGWAM DIADWEPPGT
SELVRRLNER VTPGAVILLH DGGGDRSQTV QAVDQVIPQW KAQGWTFTFP AGAPTNPGPT
PTPTPTPTPT PTPTPGPGNP GATCDVDYTV VNDWGHGMQG AITVSNTGSS PINNWTLQFS
FSGVNISNGW NGEWSQSGSQ ITVHAPAWNS TLQPGQSVEL GFVADKTGNV SPPSQFTLNG
ATCS