| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2784 |
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| Symbol | |
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| ID | 3581320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 3266636 |
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| End bp | 3269356 |
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| Gene Length | 2721 bp |
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| Protein Length | 906 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637686508 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_290840 |
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| Protein GI | 72163183 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.782627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCACCCA AGAAGGGCAG TGCCGGAGAC GGCGTGAAGG ACACCGCACG GGGCGGAGGA
AACAAACTCG TCATCGTCGA GTCGCCCGCC AAGGCGAAGA CGATCGCGGG CTACCTCGGC
CCCGGCTACA TCGTGGAGTC CAGCATCGGC CACATCCGGG ATCTGCCAAA CAAGGCCGCG
GAGATCCCGG CACGCTACAA GGACGAGCCG TGGGCGCGCC TCGGAGTGAA CGTCGACCGC
GACTTTGAGC CTCTCTACGT GGTCAACGCC GACAAGAAAG CCCAAGTCAA GAGGCTCAAA
GAACTGCTGG CCGAAGCTGA CGAACTGTAC CTGGCCACCG ACGAGGACCG CGAAGGCGAA
GCGATCGCCT GGCACCTGCG CGAGGAACTC AAACCCACGA TCCCGGTCAA GCGCATGGTG
TTCAACGAGA TCACCAAGGA AGCCATCCGC CACGCGGCCC AACACACCCG CGACCTCAAC
CTGCGCCTGG TCGACGCCCA GGAGACCCGC CGCATCCTCG ACCGGCTCTA CGGCTACGAG
GTCTCCCCGG TGCTGTGGAA GAAGGTCATG CCCAGCCTGT CGGCAGGGCG AGTGCAGTCC
GTGGCGACCC GTCTCGTGGT TGAACGGGAA CGCGAACGGA TCGCGTTCAC CCCGGCCGAA
TACTGGGGCC TCAAAGCTGT CTTCGCTGTC CTCACCGGGA CAGACGGGGC CGACCCCACG
ACCTTCCCGG CCACCCTGGC CACCGTGGAC GGCGACCGGG TCGCCCAAGG CCGCGACTTC
ACCTCCCAAG GCGTGCTGCG CTCCCCCAAG GGGGTGCGGC ACTTGGACGA GGAGACGGCG
CGCGGACTCG CGGAACGCCT GGCCGGAGCC CAGTACACGG TGCGTTCCGT GGAGCGGAAA
CCCTACCGGC GGTCGCCGTA CGCGCCGTTC CGCACCACCA CCCTGCAGCA GGAGGCCTCC
CGCAAGCTGG GCCTGTCCGC CAAGCAGACC ATGCAGGTGG CGCAGCGGCT GTACGAGAAC
GGCTACATCA CCTACATGCG CACCGACAGC ACCACCCTGT CGGAGAGCGC TATCGCCGCG
GCCCGCGCCC AAGTCGCCCG CCTGTACGGC GACAACTACC TGCCGGACAA GCCCCGCACC
TACACCAGCA AAGTCAAAAA CGCCCAGGAA GCCCACGAGG CGATCCGCCC GGCCGGCGAC
ACTTTCCGCA CCCCCGCGGA GACCGGGCTG AGCGGGGTGG AGCTCCGCCT CTACGAACTC
ATCTGGAAAC GCACGATCGC CTCCCAGATG AAGGATGCGG TCGGCGAATC GGTGAGCGTC
CGCGTCGCAG GGACCTCCAC CGCTGGCGAA CAGGTCGAAT TCTCCGCCAC CGGGAAGATC
ATCACCTTCC ACGGCTTCCT CAAAGCCTAC GTGGAAGGCA CCGACGACCC GCAGGCCGAA
CTCGACGACC GGGAACGGCG GCTGCCACCG CTCACCGAAG GAGACCCGCT GCACGCCCAA
AGCGTCGACG CGGAAGGACA CAGCACCCGG CCGCCCGCCC GCTACACCGA GGCGTCCCTA
GTCAAAGAAC TGGAAGAGCG CGAAATCGGC CGCCCCTCCA CCTACGCCAC CATCATCGGC
ACCATCCTGG AACGCGGCTA CGTGTTCAAG AAGGGCTCCG CGCTTGTGCC GTCCTTCCTG
GCGTTCGCCG TGGTCCAGTT GCTGGAGCGG CACTTCAGCC ACCTGGTCGA CTACGACTTC
ACCGCGCGCA TGGAAGACGT GCTCGACGCG ATTGCCCGCG GGGAAGCGGA ACGGGTGCCG
TGGCTGCGCC GGTTCTACTT CGGCGCTGAC GGACAGATCG GCCTCAAAGA ACTCGTCAAC
GAGCACCTGG GGGACATCGA CCCCAAGGAG ATCAGCTCGT TCCCGCTGCC GGACAGCGAC
ATCGTGCTGC GGGTCGGCCG CTACGGCCCC TACCTGGAAC GCAACGGCCA GCGGGTGAAC
GTACCCGACG ACCTCGCCCC GGACGAGCTC ACCAAGGAGC GGGCCGAAGA ACTGTTTGCC
CAGCCCAACG GGGACCGGGA ACTCGGCAAG GACCCGGAGA CGGGGCGCAC CATTGTGGCG
AAGAACGGCC GGTTCGGCCC CTATGTCACC GAGGTCATCG AAGAGACCGA AGCTGAGGCC
GAGGAGGCGA AGCCGAAGGG GCGGAAGAAG ACCGCTGCCC CCAAGCCGCG CACCGCGTCC
CTGCTGAAGT CCATGTCGTT GGAGACGATC ACCCTCGAGG ACGCGTTGAA GCTGCTCTCC
CTGCCCCGCG TCGTCGGGGA GATCGACGGG GAGCAGGTGA CCGCGCAGAA CGGCCGGTTC
GGCCCCTACT TGAAGAAAGG CAGCGAAAGC CGCTCCCTGG AAACCGAAGA GCAACTGTTC
ACGGTCACGA TCGAAGAAGC CAAGGAGCTT TTCGCCCAGC CGAAGAAGCG GCGCACCCGG
GCCGCGGCGC CGCCGCTGCG GGAACTCGGC CCGGACCCCG TCACCGGCAA GCCCATGGTG
ATCAAAGAAG GTCGGTTCGG CCCCTACGTC ACCGACGGGG AGAGCAACGC CTCCTTGCGC
AAGGGGGACG ACGTGGAGTC GCTGACCCCG GAGCGCGCCG CGGAACTGCT GGCGGAGCGG
CGGGCTAAAG CGCCCGCGAA GAAGACCACG TCCCGCACCA CCACGCGGAA GACCACGAAA
AGCACCGCGA AAAAAGCGTG A
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| Protein sequence | MPPKKGSAGD GVKDTARGGG NKLVIVESPA KAKTIAGYLG PGYIVESSIG HIRDLPNKAA
EIPARYKDEP WARLGVNVDR DFEPLYVVNA DKKAQVKRLK ELLAEADELY LATDEDREGE
AIAWHLREEL KPTIPVKRMV FNEITKEAIR HAAQHTRDLN LRLVDAQETR RILDRLYGYE
VSPVLWKKVM PSLSAGRVQS VATRLVVERE RERIAFTPAE YWGLKAVFAV LTGTDGADPT
TFPATLATVD GDRVAQGRDF TSQGVLRSPK GVRHLDEETA RGLAERLAGA QYTVRSVERK
PYRRSPYAPF RTTTLQQEAS RKLGLSAKQT MQVAQRLYEN GYITYMRTDS TTLSESAIAA
ARAQVARLYG DNYLPDKPRT YTSKVKNAQE AHEAIRPAGD TFRTPAETGL SGVELRLYEL
IWKRTIASQM KDAVGESVSV RVAGTSTAGE QVEFSATGKI ITFHGFLKAY VEGTDDPQAE
LDDRERRLPP LTEGDPLHAQ SVDAEGHSTR PPARYTEASL VKELEEREIG RPSTYATIIG
TILERGYVFK KGSALVPSFL AFAVVQLLER HFSHLVDYDF TARMEDVLDA IARGEAERVP
WLRRFYFGAD GQIGLKELVN EHLGDIDPKE ISSFPLPDSD IVLRVGRYGP YLERNGQRVN
VPDDLAPDEL TKERAEELFA QPNGDRELGK DPETGRTIVA KNGRFGPYVT EVIEETEAEA
EEAKPKGRKK TAAPKPRTAS LLKSMSLETI TLEDALKLLS LPRVVGEIDG EQVTAQNGRF
GPYLKKGSES RSLETEEQLF TVTIEEAKEL FAQPKKRRTR AAAPPLRELG PDPVTGKPMV
IKEGRFGPYV TDGESNASLR KGDDVESLTP ERAAELLAER RAKAPAKKTT SRTTTRKTTK
STAKKA
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