Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2721 |
Symbol | |
ID | 3580700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 3197014 |
End bp | 3198261 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637686444 |
Product | hypothetical protein |
Protein accession | YP_290777 |
Protein GI | 72163120 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.632989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCGTTC CGCCCGGAAA GTGCAGCATC ATTGTCGGGA TGGTCGAGGT AGGACTTGCA TTCGTTTGCG CCCTGGTGGC GTGGAGCGCC ACCGCGTCAC TCGGTGTGCG CGCATACCGG TACCCGGACA TCGCCACCAT CGCCTGGGCG GTCTCCGCGA CGGCCACCGC GATCGCGCTG AGCGCGGCGT TCCCCGCGGC GCTGCTGGAC TTCTCCAACG CCACCTTCCG GCTCCTGCAC ATCGGGATCG GGCTCATCGG CCCGCTCTTC CTGGGCTGGG GCGCCATCGA ATACACGGTG GAGTCGCCCC GCGGACGGTT CGGCACCCGT CTCGTCGTCA CCACGCTCAC CATCGTCCCG CTGGTGATCC TCACCATGGA CCGGTTGCGT GGACGCTACG ACACCAGCTA CCCGGCGGCG GCCGACCACT ACGACGTCAT CCCGATGTTC GTCCTCACCC TCGTCCATCT CTTCGTCCTC GTGGCGCTCA TCACCGGGGC GGCCCTTGCT GGAGTGCGCC TCTCCCGGGA CCCCGAACGA GGACAGCGCG AACTGGGCGT GGTGGGGCTG ATCGCGCTGG CAGCGCTTCT GGAGATCCTC GTCAGCCGGT TCGGTCTCGG CATCCTCGGC CAGCTCATGA TGCTCGGTGC AGTATCCGCC CTGTGGGCTG CGGTGCACCG GGCCAGCGCC CCCGCACGGC GCGGAGGACG GCGCCGGGTC CGCGACCACG ACGAGGACGA CTTCTTCGAC GACGAGATTG ACGACGAGGA CGAGGAGGAA GAGCCAGTGC GGCGCAGACG GCGCAGGGCC GACTACGACG AGGACGACGA AACTCCCGCC CGGGGTCGGC GGAGGAGAAG CGAATACGAC GACTACGAGG AAGACGGGGA GCCCGCACCG CGTTCCCAGG TCTCCCGACT GCAAGGCATC ATCACCATCT ACACGCTCCG GGAAGGCCAC GAAGACCTCT TCGACGCCTG CGTCGCCGAC GTCGTTGACG AAGTCGCCCG CCAGGAACCC GACACCCTCC TGTACGCCTG CCACACAGTG GCCAGCTCCC CCCAGCAGCG CATCGTCTAC GCCATCTACC GCGACCGGCT CGCCTACGAA GAACACGAAC AGCAGCCGCA CGTCATCGAC TTCGCGCGGC GTTCCGCCAG GTACGTGGTC GCCACCAACG TCATCGAGCT CTCCCTGTCC GGTGCGGTGG CGGGCGAGCG GCTGCTCGAC ATGCTCATGC CGGAGTAG
|
Protein sequence | MLVPPGKCSI IVGMVEVGLA FVCALVAWSA TASLGVRAYR YPDIATIAWA VSATATAIAL SAAFPAALLD FSNATFRLLH IGIGLIGPLF LGWGAIEYTV ESPRGRFGTR LVVTTLTIVP LVILTMDRLR GRYDTSYPAA ADHYDVIPMF VLTLVHLFVL VALITGAALA GVRLSRDPER GQRELGVVGL IALAALLEIL VSRFGLGILG QLMMLGAVSA LWAAVHRASA PARRGGRRRV RDHDEDDFFD DEIDDEDEEE EPVRRRRRRA DYDEDDETPA RGRRRRSEYD DYEEDGEPAP RSQVSRLQGI ITIYTLREGH EDLFDACVAD VVDEVARQEP DTLLYACHTV ASSPQQRIVY AIYRDRLAYE EHEQQPHVID FARRSARYVV ATNVIELSLS GAVAGERLLD MLMPE
|
| |