Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2708 |
Symbol | |
ID | 3580687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 3182396 |
End bp | 3183190 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637686431 |
Product | pyrroline-5-carboxylate reductase |
Protein accession | YP_290764 |
Protein GI | 72163107 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.702325 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGCGA TCATTGGGGC AGGGCGGATG GGTGAAGCCC TGCTCGCCGG AATCCTCCAC ACCGGGCGGG ACGCCGCGGA GGTGCTCATC AGCGAAGCGC GCGAAGACCG CGCCGCAGAA CTCTGCCAGC GCTACGGGGT CGCCGCCGCC TCCCCGGCCG AAGCCGCCGC CCGCGCAGAC ACGCTGCTGC TCGCAGTCAA ACCGCAGGAC ATGGTCGCGG CGTTGAACGA GATTGCCCCG GCACTGCCCC CCGGGCGCCT GGTGATCTCC GTAGCCGCCG GAATCACCAC AGCCGTGCTG GAAAAGCACC TTCCCGCGGA GACCGCCGTG GTCCGAGCCA TGCCCAACAC CCCTGCCCTG GTCGGCCAGG GGATGACCGC CATCGCAGCC GGAACCCACA CCCTTGAGGA GCACCTCGAC CGCGCGGAGA CCCTGCTCCG ATCGGTGGGC GAGGTCGTGC GCGTACCGGA GAAGCACCTG GACGCGGTCA CCGCCCTCTC CGGAAGCGGC CCTGCCTACT TCTACCTCGT CGCGGAAGCG ATGATCGAAG CCGGAGTGCT CCTGGGGCTG CCGCGGCCGA CCGCCGAGCG GCTCGTCACC CAGACCGCGG TGGGCTCCGC GGCAATGCTG CGCGACTCCG GGGACCATCC GACCCTGTTG CGGGAAGCAG TGACCTCGCC CGGGGGAACG ACCGCCGCTG CCCTGCGGGA ACTCGAACGC CACGGCCTGC GCAGCGCGTT CGCTGACGCG GTGGAAGCCG CGTGCCGGCG GAGCGCGGAA CTCGCTGAAG GCTGA
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Protein sequence | MIAIIGAGRM GEALLAGILH TGRDAAEVLI SEAREDRAAE LCQRYGVAAA SPAEAAARAD TLLLAVKPQD MVAALNEIAP ALPPGRLVIS VAAGITTAVL EKHLPAETAV VRAMPNTPAL VGQGMTAIAA GTHTLEEHLD RAETLLRSVG EVVRVPEKHL DAVTALSGSG PAYFYLVAEA MIEAGVLLGL PRPTAERLVT QTAVGSAAML RDSGDHPTLL REAVTSPGGT TAAALRELER HGLRSAFADA VEAACRRSAE LAEG
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