| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2690 |
|---|
| Symbol | |
|---|
| ID | 3581851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 3166387 |
|---|
| End bp | 3167703 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637686413 |
|---|
| Product | NADH-quinone oxidoreductase, F subunit |
|---|
| Protein accession | YP_290746 |
|---|
| Protein GI | 72163089 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.363357 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGACGC TGACCCCCGT GCTGTCCCGC AACTGGGACC GCCCGGACTC CTACACCCTC
GACGCCTACC GGGAGAACGG TGGCTACGAG GCGCTGCGCA AGGCCCTGAC CATGGAGCCC
GACGCCATCG TCGAGATGGT CAAGGCCTCC GGCCTGCGCG GCCGCGGCGG TGCCGGCTTC
CCCACCGGGA TGAAGTGGGG TTTCCTCCCC AAGGACAACC CCAAGCCGCG CTACCTCGTC
GTCAACGCCG ACGAGTCTGA GCCCGGCACC TGCAAAGACA TCCCGCTGAT GATGGCCAAC
CCGCACGCGC TCATCGAAGG CGTCATCATC TCCGCCTACG CGATCAACAG CCACCAGGCC
TTCATCTACG TCCGCGGGGA GGTCCTGCAC GTCATCCGGC GGCTGCGGCA CGCCGTCGCC
GAAGCCTACG AGGCCGGGCT GCTCGGTAAG GACATCCTCG GCAGCGGCTT CGACCTCGAC
GTCGTCGTCC ACGCCGGGGC GGGCGCCTAC ATCTGCGGTG AGGAGACCGC CCTGCTGGAC
TCGCTCGAGG GCTACCGCGG CCAGCCTCGC CTCAAGCCGC CGTTCCCCGC CGTCGCAGGT
CTGTACGCCT CACCCACCGT GGTGAACAAC GTCGAATCCA TCGCCACCGT GCCGAGCATC
GTCGCCAACG GCGCCGAGTG GTTCAAGTCC ATGGGCACGG AGAAGTCCGC CGGCTTCGGC
TTCTTCTCCC TGTCCGGCCA CGTCAAGCGG CCCGGCCAGT ACGAGGCCCC GCTCGGCGTG
ACCTTGCGCG AACTGCTCGA GATGGCCGGC GGTATCCGCG ACGGGCACCG GCTCAAGTTC
TGGACCCCCG GTGGCTCCTC CACCCCGATC TTCACCGAGG AGCACATCGA CATCCCCCTG
GACTTCGAGT CGGTCGGCGG AGCGGGCTCC ATGCTCGGCA CCCGCGCGCT GCAGATCTTC
GACGAAACCA CCTCGGTCGT CCGGGTCGTG CGCGGCTGGA TCGAGTTCTA CGCGCACGAG
TCCTGCGGCA AGTGCACTCC GTGCCGCGAA GGCAACTACT GGATGGTCCA AGTCCTGCGC
CGTATCGAAG CAGGCAAGGG GACCCAAGAG GACATCGACA CGCTGCTCGA CATCTGCGAC
AACCTGCTCG GGCGCTCCTT CTGCGCGCTC GGGGACGGTG CGACCAGCTC GGTGACCTCG
GCGATCAAGT ACTTCCGGGA GGAGTTCATC GCGGGAACCC ACACTCCCGC GTGGGAGCTG
TTCCCGTACC AGCGCACCAC TCGCTGGGCG AATGAGTCCG TGGAAGAGGA CGCCTGA
|
|---|
| Protein sequence | MTTLTPVLSR NWDRPDSYTL DAYRENGGYE ALRKALTMEP DAIVEMVKAS GLRGRGGAGF
PTGMKWGFLP KDNPKPRYLV VNADESEPGT CKDIPLMMAN PHALIEGVII SAYAINSHQA
FIYVRGEVLH VIRRLRHAVA EAYEAGLLGK DILGSGFDLD VVVHAGAGAY ICGEETALLD
SLEGYRGQPR LKPPFPAVAG LYASPTVVNN VESIATVPSI VANGAEWFKS MGTEKSAGFG
FFSLSGHVKR PGQYEAPLGV TLRELLEMAG GIRDGHRLKF WTPGGSSTPI FTEEHIDIPL
DFESVGGAGS MLGTRALQIF DETTSVVRVV RGWIEFYAHE SCGKCTPCRE GNYWMVQVLR
RIEAGKGTQE DIDTLLDICD NLLGRSFCAL GDGATSSVTS AIKYFREEFI AGTHTPAWEL
FPYQRTTRWA NESVEEDA
|
|---|
| |