| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2653 |
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| Symbol | |
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| ID | 3581469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 3116804 |
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| End bp | 3120679 |
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| Gene Length | 3876 bp |
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| Protein Length | 1291 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637686372 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_290709 |
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| Protein GI | 72163052 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.229065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCGACG TCAACTTCTT CGACGAGCTC CGGATTGGTC TCGCGACCGC TGACGACATC
CGTCAGTGGT CGCACGGCGA GGTCAAAAAG CCGGAAACCA TCAACTACCG GACCCTCAAG
CCCGAAAAGG ACGGACTCTT CTGCGAGAAG ATCTTCGGTC CGACCCGGGA CTGGGAGTGC
TACTGCGGTA AGTACAAGCG GGTCCGCTTC AAGGGCATCA TTTGCGAACG CTGCGGTGTC
GAGGTCACGC GGGCCAAGGT GCGGCGGGAA CGCATGGGCC ACATCGAGCT GGCCGCTCCC
GTCACCCACA TCTGGTACTT CAAGGGCGTG CCCAGCCGCC TGGGCTACCT CCTCGACCTC
GCACCCAAGG ACCTGGAGAA GGTCATCTAC TTCGCGGCCT ACATGGTCAC CTGGGTGGAC
ACCGAGGCCC GCGAGCGCGA CCTGCCGTCC CTGGAAGCCC AGATCTCCGT CGAGCGGCAG
CACCTCGAGC AGCGCCGCGA CTCCGCGATC GAGGAGCGCC ACCGCAAGCT CGAAGCCGAC
CTGGCCGAAC TGGAGGAACA GGGCGCCAAG GCGGATGCCC GCCGCAAGGT GCGCGAGGCC
GCCGAGCGGG AGATCCGGCA GATCCGCGAC CGCGCCCAGC GGGAGATCGA CCGCCTCGAA
GAGGTCTGGA ACCGCTTCAA GAACCTCAAG GTCCAGGACC TCGAAGGCGA TGAGCAGCTC
TACCGCGAAA TGCGGGACCG CTTCGGCAAG TACTTCCGCG GCGGTATGGG CGCCCAGGCG
ATCAAGGAGC GGCTGGCCAA CTTCGACCTG GAGGCCGAAG CCGAGAAGCT CCGCGAGATC
ATCCGCACGG GCAAGGGCCA GAAGAAGGCC CGCGCCCTCA AGCGGCTCAA GGTCGTCTCG
GCGTTCCTCA ACACCCGCAA CAGCCCGATG GGCATGGTGC TGGACTGCGT CCCGGTGATC
CCGCCGGACC TGCGTCCCAT GGTTCAGCTC GACGGTGGCC GCTTCGCCAC CTCCGACCTG
AACGACCTGT ACCGTCGGGT CATCAACCGC AACAACCGGC TCAAGCGGCT TCTCGACCTC
GGCGCGCCCG AGATCATCGT CAACAACGAG AAGCGCATGC TCCAGGAGGC CGTTGACGCG
CTGTTCGACA ACGGCCGCCG CGGCCGCCCC GTCACCGGTC CGGGCAACCG TCCGCTCAAG
TCCCTGTCCG ACATGCTCAA GGGCAAGCAG GGACGGTTCC GCCAGAACCT GCTGGGTAAG
CGCGTCGACT ACTCTGGCCG CTCGGTCATC GTGGTCGGCC CGCAGCTCAA GCTGCACCAG
TGCGGCCTGC CCAAGCAGAT GGCGCTGGAG CTGTTCAAGC CGTTCGTGAT GAAGCGCCTG
GTCGACCTGA ACCATGCGCA GAACATCAAG AGCGCCAAAC GCATGGTGGA GCGGGCCCGG
CCCGTGGTGT GGGACGTGCT GGAGGAAGTC ATCTCCGAGC ACCCCGTCCT GCTCAACCGG
GCGCCGACCC TGCACCGCCT GGGCATCCAG GCGTTCGAAC CGCAGTTGGT CGAGGGCAAG
GCCATCCAGA TCCACCCGCT CGTCTGCACC GCGTTCAACG CGGACTTCGA CGGCGACCAG
ATGGCGGTCC ACCTGCCGCT GTCGGCGGAG GCCCAGGCCG AGGCGCGCAT CCTGATGCTC
GCCACGAACA ACATCCTCAA GCCCTCCGAC GGCAAGCCGG TCACCATGCC CACCCAGGAC
ATGGTCATCG GCCTGTACTA CCTGACCACC ATGAAGGAGG GTGCGAAGGG AGAAGGCCGG
GCGTTCAGCA ACATCGGCGA GGCCATCATG GCCTACGACC TCGGCGAACT CGACCTGCAA
GCGAAGATCA AACTGCGGGT CGAGGGCGAC ACGGTGCCGC CGGTGAACTG GGAGCCGCCC
GAGGACTACC AGCCGGGCCA GCCGTACATC CTGGAGACCA CCCTCGGCCG GTACCTGTTC
AACGAGACCA CGCCCGAGGA CTACCCGTTC GTCAACCAGC AGATGGGCAA GAAGCAGTTG
TCCGCGCTGG TGACCGAACT GGCGGAGAAG TACTCGAAGG TCCAGGTGGC TACCACCCTG
GACGCCCTCA AGGACGCCGG ATACTACTGG GCGACCCGTT CGGGGCTGAC CATCAGCATC
AGCGATGTGA TCCCGCCGCC GAACAAGCAG CAGATCCTCG ACAAGTACGA GCAGCAGGCC
CAGAAGATCC AGCGCCAGTA CGAGCGTGGT CTGATCAGCG ACGACGAACG CCGCCAGGAG
CTGATCCACA TCTGGACCAA GGCCACGGAC GAAGTGGCCA AGGACATGGA GGAGAACTCG
CCTCCGGACA ACCCGGTCTG GATGATGGTC AACTCCGGAT CCCGCGGTAA CCCGCTGCAG
GTCCGGCAGA TCGCCGCTAT CCGCGGCCTG GTCTCCAACA CCAAGGGTGA GACGATTCCG
CGGCCGATCA AGTCCTCGTA CCGCGAGGGC CTAACGGTGC TGGAGTACTT CATCTCCACC
CACGGCCAGC GGAAGGGTCT GGCGGACACC GCGCTGCGTA CCGCCGACTC CGGATACCTC
ACCCGTCGTC TCGTGGACGT CGCCCAGGAC GTCATCGTCC GCGAGGTCGA CTGCGGCACT
GACCGTTTCC TGTGGCAGGA GATCGGCGAA CGGCGCCCCG ACGGCACGAT TGTGCGCAAG
CACAACGTCG AGAACACCGG TTTCGGCCGG ACTCTCGCCG AAGACGTGGT GGTCGACGGC
AAGGTCATCG CGACCAAGCT GAGCGACACT ACCGAGGCGC TGATCGACAA GCTGCTCGCC
GCCGGGGTCA CCCGGATCCG CATCCGCAGC GCACTGGTGT GCGAGTCCAA GATCGGGGTG
TGCGCCACCT GCTACGGCCG CTCCCTGGCC ACAGGCAAGC CGGTCGACGT CGGTGAGGCT
GTCGGTATCA TCGCCGCCCA GTCCATTGGT GAGCCCGGTA CCCAGCTGAC CATGCGTACC
TTCCACATGG GTGGTACGGC GGGTCAGGAC ATCACCCACG GTCTGCCCCG TGTCCAGGAG
CTGTTCGAGG CCCGCGTCCC CAAGGGCGTG GCCCCGATCA GCGAAGTGGA GGGCCGGGTC
CGGATTGAGG AGACCGACAA GAGCCGTAAG ATCATTGTCG TCCCGGACGA CGGCTCCGAC
GAGGTCAGCT ACCAGGTGCC CATGCGGGCT CCGCTGCTTG TCCAAGACGG GCAGCGCGTC
GAAGTCGGTC AGCAGCTCGT CCAGGGTACG GTCAACCCGC ACGAGATCCT GCGGATCCTC
GGCCCGCGCG CGGTGCAACA GCACCTCGTC TCCGAGGTCC AGGAGGTCTA CAAGTCGCAG
GGTGTCTCGA TCCACGACAA GCACATCGAG ATCATCGTGC GGCAGATGCT CAAGCGGGTG
AACGTCCTCG AGTCCGGTGA CACTAAGCTG CTGCCGGGCG AAATGATCGA ACGTCCCAAG
TTCGAGGAGA TCAACCGCCG CGTCGTGGCC GAAGGCGGCC AACCCGCTTC GGCTCGTCCC
GTCCTCCTCG GCATCACGAA GGCGTCGTTG GCCACAGAAT CGTGGCTCTC CGCGGCCTCC
TTCCAGGAGA CCACCCGGGT GCTCACCGAG AACGCCATTC ACGGTAAGAG CGACCCGCTG
CTCGGTCTCA AGGAGAACGT CATCATCGGT AAGCTCATCC CGGCCGGTAC CGGTATGCCG
CAGTACCGGA ACATCCGGGT TGAGCCCACT GAGGAGGCCA AGGCCTCGAT GTACTCGGTT
TCCTCCTACG AGGAGCCCAG TGAGTACACC TTCGGCCAGG GATCCGGTGA GGCCGTTCCG
CTGGAGGACT ACGATTTCGG GTCCTACAAC AGGTAA
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| Protein sequence | MLDVNFFDEL RIGLATADDI RQWSHGEVKK PETINYRTLK PEKDGLFCEK IFGPTRDWEC
YCGKYKRVRF KGIICERCGV EVTRAKVRRE RMGHIELAAP VTHIWYFKGV PSRLGYLLDL
APKDLEKVIY FAAYMVTWVD TEARERDLPS LEAQISVERQ HLEQRRDSAI EERHRKLEAD
LAELEEQGAK ADARRKVREA AEREIRQIRD RAQREIDRLE EVWNRFKNLK VQDLEGDEQL
YREMRDRFGK YFRGGMGAQA IKERLANFDL EAEAEKLREI IRTGKGQKKA RALKRLKVVS
AFLNTRNSPM GMVLDCVPVI PPDLRPMVQL DGGRFATSDL NDLYRRVINR NNRLKRLLDL
GAPEIIVNNE KRMLQEAVDA LFDNGRRGRP VTGPGNRPLK SLSDMLKGKQ GRFRQNLLGK
RVDYSGRSVI VVGPQLKLHQ CGLPKQMALE LFKPFVMKRL VDLNHAQNIK SAKRMVERAR
PVVWDVLEEV ISEHPVLLNR APTLHRLGIQ AFEPQLVEGK AIQIHPLVCT AFNADFDGDQ
MAVHLPLSAE AQAEARILML ATNNILKPSD GKPVTMPTQD MVIGLYYLTT MKEGAKGEGR
AFSNIGEAIM AYDLGELDLQ AKIKLRVEGD TVPPVNWEPP EDYQPGQPYI LETTLGRYLF
NETTPEDYPF VNQQMGKKQL SALVTELAEK YSKVQVATTL DALKDAGYYW ATRSGLTISI
SDVIPPPNKQ QILDKYEQQA QKIQRQYERG LISDDERRQE LIHIWTKATD EVAKDMEENS
PPDNPVWMMV NSGSRGNPLQ VRQIAAIRGL VSNTKGETIP RPIKSSYREG LTVLEYFIST
HGQRKGLADT ALRTADSGYL TRRLVDVAQD VIVREVDCGT DRFLWQEIGE RRPDGTIVRK
HNVENTGFGR TLAEDVVVDG KVIATKLSDT TEALIDKLLA AGVTRIRIRS ALVCESKIGV
CATCYGRSLA TGKPVDVGEA VGIIAAQSIG EPGTQLTMRT FHMGGTAGQD ITHGLPRVQE
LFEARVPKGV APISEVEGRV RIEETDKSRK IIVVPDDGSD EVSYQVPMRA PLLVQDGQRV
EVGQQLVQGT VNPHEILRIL GPRAVQQHLV SEVQEVYKSQ GVSIHDKHIE IIVRQMLKRV
NVLESGDTKL LPGEMIERPK FEEINRRVVA EGGQPASARP VLLGITKASL ATESWLSAAS
FQETTRVLTE NAIHGKSDPL LGLKENVIIG KLIPAGTGMP QYRNIRVEPT EEAKASMYSV
SSYEEPSEYT FGQGSGEAVP LEDYDFGSYN R
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