| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2648 |
|---|
| Symbol | tuf |
|---|
| ID | 3581464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 3109132 |
|---|
| End bp | 3110325 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637686367 |
|---|
| Product | elongation factor Tu |
|---|
| Protein accession | YP_290704 |
|---|
| Protein GI | 72163047 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0050] GTPases - translation elongation factors |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.428976 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGAAGG CCAAGTTCGA GCGGACCAAG CCGCACGTAA ACATCGGCAC CATCGGTCAC
ATCGACCACG GTAAAACCAC GCTGACCGCG GCGATTACCA AGGTTCTGCA CGACAAGTAC
CCGGACCTCA ACCCGTTCAC GCCTTTCGAG GACATCGACA AGGCCCCGGA GGAGCGCGAG
CGCGGTATCA CCATCTCCAT CTCGCACGTG GAGTACCAGA CCGAGAGCCG CCACTACGCG
CACGTGGACT GCCCCGGTCA CGCGGACTAC GTGAAGAACA TGATCACCGG TGCCGCCCAG
ATGGACGGCG CGATCCTGGT GGTCGCCGCT ACTGACGGTC CGATGCCGCA GACCAAGGAG
CACGTGCTCC TGGCTCGCCA GGTCGGCGTC CCCTACATTG TCGTGGCTCT CAACAAGTCC
GACATGGTGG ACGACGAGGA GATCTTCGAC CTCGTTGAGC TCGAGGTCCG CGAGCTGCTC
AACGAGTACG AGTTCCCGGG CGACGAGGTG CCCGTGATCC GCGTCTCCGC GCTGAAGGCC
CTCGAGGGTG ACCCCGAGTG GGGCAAGAAG ATCCTCGAGC TGATGGAGGC CGTGGACCAG
AACATCCCCG AGCCGCAGCG GGACATCGAC AAGCCGTTCC TCATGCCGAT CGAGGACGTG
TTCTCGATCA CCGGTCGCGG TACCGTCGTC ACCGGCCGTA TCGAGCGCGG TGTCATCAAC
GTCAACGACA CCGTCGAGAT CGTCGGCCTC AAGGACGACA AGATCACCAC CACCGTCACC
GGTGTGGAGA TGTTCCGCAA GCTGCTCGAC CAGGGCCAGG CCGGTGACAA CGTCGGTCTG
CTGCTGCGTG GTGTCAAGCG CGAGGAGGTG GAGCGCGGTC AGGTCGTCAT CAAGCCTGGC
ACCACCACCC CGCACACCGA GTTCGAGGCC CAGGTCGTCA TCCTCTCCAA GGACGAGGGT
GGCCGCCACA CGCCCTTCTT CAACAACTAC CGCCCGCAGT TCTACTTCCG GACCACGGAC
GTCACCGGTG TCGTTACCCT CCCCGAGGGC ACCGAGATGG TCATGCCCGG TGACAACACC
TCGATGACCG TCAAGCTGAT CCAGCCGGTC GCGATGGAAG AGGGTCTGAA GTTCGCCATC
CGTGAGGGTG GACGGACCGT AGGCGCGGGT CGCGTCACCA AGATCATCAA GTAG
|
|---|
| Protein sequence | MAKAKFERTK PHVNIGTIGH IDHGKTTLTA AITKVLHDKY PDLNPFTPFE DIDKAPEERE
RGITISISHV EYQTESRHYA HVDCPGHADY VKNMITGAAQ MDGAILVVAA TDGPMPQTKE
HVLLARQVGV PYIVVALNKS DMVDDEEIFD LVELEVRELL NEYEFPGDEV PVIRVSALKA
LEGDPEWGKK ILELMEAVDQ NIPEPQRDID KPFLMPIEDV FSITGRGTVV TGRIERGVIN
VNDTVEIVGL KDDKITTTVT GVEMFRKLLD QGQAGDNVGL LLRGVKREEV ERGQVVIKPG
TTTPHTEFEA QVVILSKDEG GRHTPFFNNY RPQFYFRTTD VTGVVTLPEG TEMVMPGDNT
SMTVKLIQPV AMEEGLKFAI REGGRTVGAG RVTKIIK
|
|---|
| |