| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2620 |
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| Symbol | rpsM |
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| ID | 3580634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 3094333 |
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| End bp | 3094713 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637686339 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_290676 |
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| Protein GI | 72163019 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGCGCA TCGCCGGCGT CGACCTCCCC CGGGACAAAA GGGTGGAGGT CGCTCTTACA
TACGTCTACG GCATCGGCCG GAGCCGCGCG GCCGAGACTC TGGCCAACAC CGGGGTCAAC
CCCGACACCC GCGTCTACCA GTTGACCGAA GAGGAGCTGG TCAAGCTCCG CGAGTGGATC
GACGCCAACT ACAAGGTCGA GGGTGACCTG CGCCGCGAGG TTGCGGCCGA CATTCGGCGC
AAGATCGAGA TCGGCTGCTA CCAGGGTATC CGGCACCGCC GCGGCCTGCC GGTCCGCGGC
CAGCGCACGC AGACCAACGC ACGGACCCGC AAGGGCAAGA AGAAGACCGT GGCCGGAAAG
AAGAAGGCCG GTCGGAAGTA G
|
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| Protein sequence | MARIAGVDLP RDKRVEVALT YVYGIGRSRA AETLANTGVN PDTRVYQLTE EELVKLREWI
DANYKVEGDL RREVAADIRR KIEIGCYQGI RHRRGLPVRG QRTQTNARTR KGKKKTVAGK
KKAGRK
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