| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2596 |
|---|
| Symbol | |
|---|
| ID | 3581202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 3065065 |
|---|
| End bp | 3066567 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637686315 |
|---|
| Product | inosine-5'-monophosphate dehydrogenase |
|---|
| Protein accession | YP_290652 |
|---|
| Protein GI | 72162995 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0516] IMP dehydrogenase/GMP reductase
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | [TIGR01302] inosine-5'-monophosphate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTCA AACCAACAGG AGACCAGGAG GAGTTCCAGA AAGTGCTCCC TCCCGGGCTC
ACCTATGACG ATGTCCTGCT GGTACCCGCG TACTCGGATC TCCAGCCTGG CGAGGCGAAC
ACGACCACCC GTCTCACCCG CAATATCACC CTGAGCATCC CGCTGGTCTC CGCGGCAATG
GACACCGTGA CCGAGGCGCG GATGGCCGTG GCGATCGCTC GGCAAGGCGG GGCCGGAGTC
CTGCACCGCA ACCTCTCGAT CGAGGACCAG GCCGCCCAGG TCGACCTGGT CAAACGCTCC
GAAGCGGGGA TGATCACCCA CCCGGTGACC TGCCACCCCG ACGACACGCT CGCCGACGTG
GAACGGCTCA GCGCCCACTA CCGGATCTCC GGTGCCCCCG TGGTCGACGA CGACGGGCGC
CTCGTCGGGA TCGTCACCAA CCGGGACATG CGTTTCGAAG AGGACCGCTC CCGTCCGGTC
CGCGAAGTCA TGACCCCCAT GCCGCTGGTC ACCGCCCCGG TCGGCGTGTC CCGCGAGGAA
GCGTTCAGAC TGCTGCGCGC CAACAAGGTC GAAAAGCTTC CGCTCGTGGA CGACGAGGGT
CGGCTGCGCG GCCTCATCAC CGTCAAAGAC TTCACGAAGA GCGAGCAGTA CCCGAACGCC
ACCAAGGACG CTGAGGGCCG ACTCGTCGTG GGTGCCGCGG TCGGTGTCGG ACCCGAGGCG
GAGGAGCGCG CCAAAGCGCT CGTGGACGCC GGGGTCGACT TCCTCGTCGT GGACACCGCG
CACGGCCACT CCGCCGGGGT GCTGGAAATG GTCGCCAAGC TCAAAGCCAA CACCCGGGTG
GATGTCGTCG GCGGGAACAT CGCGACCCGC GCGGCCGCCC AGGCGCTCAT CGACGCCGGC
GCGGACGCGG TCAAGGTGGG GGTGGGCCCA GGCTCCATCT GCACCACCCG GGTGATCGCG
GGCGTGGGCG CCCCCCAGAT CACCGCCATC CTGGAAGCCG CGAAAGCCGC CGGCCCCGCC
GACGTGCCGC TGATCGCCGA CGGCGGACTC CAGTACTCGG GGGACATCGC CAAGGCCGTG
GCCGCCGGCG CCAGCACGGT GATGATCGGA AGCCTGCTGG CCGGGGTGGA GGAGAGCCCT
GGCGAGCTCC TCTTCATCAA CGGCAAGCAG TACAAGTCCT ACCGCGGCAT GGGTTCGCTC
GGCGCCATGC GGGGCCGCTC CTACTCCAAG GACCGCTACT CCCAGGCCGG GGTGGTCACG
GACGACCAGC TCATCCCCGA AGGCATCGAG GGCCGCGTCC CCTACCGGGG CCCGCTGTCC
GCGGTGGCGC ACCAGCTCAT CGGCGGGCTG CGCCAGTCCA TGTGGTATGC GGGGGTGCGC
ACCCTGGACG AACTGCGTGA GCGCGGCCAG TTGATGCAGA TCACCTCTGC CGGGCTGAAA
GAAAGCCACC CGCACGACGT CCAGATGGTG GTCGAGGCCC CCAACTACCA GGCGCGCAAC
TGA
|
|---|
| Protein sequence | MSLKPTGDQE EFQKVLPPGL TYDDVLLVPA YSDLQPGEAN TTTRLTRNIT LSIPLVSAAM
DTVTEARMAV AIARQGGAGV LHRNLSIEDQ AAQVDLVKRS EAGMITHPVT CHPDDTLADV
ERLSAHYRIS GAPVVDDDGR LVGIVTNRDM RFEEDRSRPV REVMTPMPLV TAPVGVSREE
AFRLLRANKV EKLPLVDDEG RLRGLITVKD FTKSEQYPNA TKDAEGRLVV GAAVGVGPEA
EERAKALVDA GVDFLVVDTA HGHSAGVLEM VAKLKANTRV DVVGGNIATR AAAQALIDAG
ADAVKVGVGP GSICTTRVIA GVGAPQITAI LEAAKAAGPA DVPLIADGGL QYSGDIAKAV
AAGASTVMIG SLLAGVEESP GELLFINGKQ YKSYRGMGSL GAMRGRSYSK DRYSQAGVVT
DDQLIPEGIE GRVPYRGPLS AVAHQLIGGL RQSMWYAGVR TLDELRERGQ LMQITSAGLK
ESHPHDVQMV VEAPNYQARN
|
|---|
| |