| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2539 |
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| Symbol | |
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| ID | 3582040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 2993981 |
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| End bp | 2994730 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637686255 |
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| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase |
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| Protein accession | YP_290595 |
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| Protein GI | 72162938 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.0914773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCTCG ATCAGCCCGC GCACCGCCGG CCGCGGGTCG CCGCTGCTGT CCTCGCCGGC
GGCGTAGGGT CGCGCATGGG CAGTGCGCAC CCCAAACAGC TCCTGCGGCT GGCTGGGCAG
ACCATCCTGG AACGCTCGGT CGCCGCCCTG TGCGCCGCCC CAGAGGTGGA CGAGGTCGTC
GTGGTCATGA ACGCCGCCCA CCTCGCGGAA GCGGAGAAGA TCCTCGCCGA AGGCAGGTAC
GACAAGGTGT CCCGGATCGT TCCGGGAGGA GCGAGCCGTT CCGAGAGCTC TCTCGCCGCC
CTGCAGGCAG TCGACGACTA CGACGACAAC GACCTGCTGC TCCTGCACGA CGCCGCGCGT
CCGCTGGTCA GCGGCCGCAC GATCACTGCC TGTGTGACTG AACTTACCGA AGTCGGCGCG
GTCGGCGTGG CTGTACCGTC CAGTGACACC GTGGTCCAGG TCACCTTGGA CGCCTCTGGA
CGCGAAGTGA TCGCCGCGGT CCCCGACCGC GCTGCGCTGC GTCGGATGCA GACCCCGCAG
GGTTTTCGGC TCGGCGTGAT CCGCCGGGCC TATGCGCGAG CGTTCGCCGA ACCCGGGTTC
ACCGCCACGG ACGACTGCGG TGTCGTCCTG CGCTACCTGC CTGAGGAACC CGTGCGTATC
GTCACCGGGG AGGAGAGCAA CATCAAAGTG ACCCATCCCA GCGACCTTGC CGTGGCTGAA
GCCCTGCTCC GCACCGGGGT GGCGCAGTGA
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| Protein sequence | MSLDQPAHRR PRVAAAVLAG GVGSRMGSAH PKQLLRLAGQ TILERSVAAL CAAPEVDEVV
VVMNAAHLAE AEKILAEGRY DKVSRIVPGG ASRSESSLAA LQAVDDYDDN DLLLLHDAAR
PLVSGRTITA CVTELTEVGA VGVAVPSSDT VVQVTLDASG REVIAAVPDR AALRRMQTPQ
GFRLGVIRRA YARAFAEPGF TATDDCGVVL RYLPEEPVRI VTGEESNIKV THPSDLAVAE
ALLRTGVAQ
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