| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2538 |
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| Symbol | |
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| ID | 3582039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2992723 |
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| End bp | 2993553 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637686254 |
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| Product | lipopolysaccharide exporter |
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| Protein accession | YP_290594 |
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| Protein GI | 72162937 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.094408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGTCGA GGACGCTGGA CGTCTGGCAA CACCGGAAAG TCGTCAGACA CCTGGTCCGC
CGTGACCTCA AAGTCAAGTA CCAGAATTCG ATCCTCGGTT ACGCCTGGTC GATGTTAGAG
CCGCTGGCGA TGGCCTGCGT CTACTACTTC GTCTTCGGCG TGGTGTTCGC GGCGACTGGC
GGAGCGCGCG AGGCACCGGG CGGCCCGGAC GCGCCCGGGG GCTACGCCCT GTTCCTGCTG
TCAGGGCTGC TGCCGTGGAT GTGGTTCAGT GCGGCGCTCA GCGACGCGCC CCGCGCACTC
ACCACCCACT CCAAGCTCAT CACCACGATG AAAGTGCCCC GGGAGATCTT CCCCCTGGCC
ATCGTGCAGA CCAAATTCGT GGAGTACCTG CTCACCTGGC CTGTCCTGCT GATGTTCGTC
GTGGTGCTGC GGGGCGAGAC CGGGTGGAAC TTCTTCTGGG TCATCCCGGC GATCGCGGTG
CAGTTCATCC TGTCGCTGGG GATGACTCTG CTGCTCTCCT CCATCAACGT GCTGCTGCGC
GACGTGGAAC GGATCGTTCG TATCCTGAAT CGAGTGCTGT TCTACAGCAC GCCCGTCATC
TACCCGCTGT TCCGCGTCAC GGAGATTGAC GCGCTGCCCG ACTGGTTCAA GTGGCTCTAC
CAGCACAATC CGCTGGCAGG GATTTTCCAG ATGCACCACG CGGTGTGGTA CGCCAGCGAA
GCGCCTCCGG CGTCCGTCTT GTGGACGACG GTCGGCGGAG CCATCCTGGT GATGTTGGTT
GGGTACGTCA CGTTCCGACG ACTGGAGAGC GCCGTCCTTA AGGAGCTGTA A
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| Protein sequence | MASRTLDVWQ HRKVVRHLVR RDLKVKYQNS ILGYAWSMLE PLAMACVYYF VFGVVFAATG
GAREAPGGPD APGGYALFLL SGLLPWMWFS AALSDAPRAL TTHSKLITTM KVPREIFPLA
IVQTKFVEYL LTWPVLLMFV VVLRGETGWN FFWVIPAIAV QFILSLGMTL LLSSINVLLR
DVERIVRILN RVLFYSTPVI YPLFRVTEID ALPDWFKWLY QHNPLAGIFQ MHHAVWYASE
APPASVLWTT VGGAILVMLV GYVTFRRLES AVLKEL
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