| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2529 |
|---|
| Symbol | |
|---|
| ID | 3582030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 2984404 |
|---|
| End bp | 2985723 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637686245 |
|---|
| Product | putative UDP-glucose/GDP-mannose dehydrogenase |
|---|
| Protein accession | YP_290585 |
|---|
| Protein GI | 72162928 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGCGTCT CGACCTACAC CTCTGACCTG GTGGTCGTCG GCTTGGGTTA TGTCGGGCTT
CCGTTGGCGC ATGAAGCATG CCGGTCCGGT CTGAAGGTGA CCGGCCTCGA CGTGAACCAG
CGCGTGGTCG ACGGGCTGAA CGCCGGAAAG TCGCATATCG ACGACCTCTC CGAGCTGGAC
ATCGCGGATA TGCGGGCTGC CGGGTTCACC GCAACCTCGG ACCCCAGCGT GCTCCGCAAC
GCCCAAACAA TCGTGATCTG CGTCCCTACG CCTCTCTCGG AGGAGGGTTC TCCCGACCTC
AGCGCGGTCA CCTCCGCGGC TGAGACCATC GCGGCCCACC TGTCCCCGGG AACCCTGGTC
ATTCTGGAGT CCACGACCTT CCCCGGCACC ACCGACGAGG TGCTCCGGCC GATTCTGGAA
CGCTCCGGCC TGGTCGCGGG GAAAGACTTC CACCTGGCGT TCTCCCCCGA GCGGATCGAC
CCGGGCAACA CGCTGTTCGG CGTGGCTAAC ACACCGAAGG TCGTCGGCGG GTACACCGAA
CTCTGCGGCG AGATCGCGGC CGCCTTCTAC GGCAAGTTCG TGCGCACGGT GGTGCGGGCG
CGCGGCACTC GGGAAGCGGA GATGGCCAAG CTCCTGGAGA ACACGTACCG GCACGTCAAC
ATCGCCCTGG TTAACGAGAT GGCGATCTTC TGCCGCGAAC TGGGGGTGGA CCTGTGGGAC
GCCATCGCCT GCGCTGCCAC TAAACCCTTC GGCTTCCAGG CGTTCTACCC CGGGCCAGGG
GTGGGCGGCC ACTGCATCCC TATCGACCCC AACTATTTGT CGTACAAGGT CAAGACCCTG
GGCTACCCCT TCCGTTTCGT GGAGCTCGCC CAGGAGATCA ACTCGCGCAT GCCGGACTAT
GTGCTGTGGC GGGTCCAGGA CATGCTCAAC GAGGCCGGGC TGGCGCTGTC GCGGTCGACG
ATCCTGCTGC TGGGGGTCAC CTACAAGGCG AACATCGCTG ACCAGCGGGA GTCTCCGTCC
CGGGCCGTGG CAGCCAAGCT CATGCAGAAA GGCGCCACGC TGCTCTTCCA CGACCCGCAT
GTTCCGGAGT GGCAGGTGAA CGGGTCTCCG ATCCCGCGCG CGGACGACCT GGAGCAGGCA
CTGGGTGAAG CGGACCTGAC GGTGCTCCTC ACCGACCACT CCGAGTACAC GCCCAAGATG
CTGCTGGAGC GGTGCCAGCG CCTCCTCGAC ACCAGGGGGG TGCTGCGCCG CGCTGACTCC
GAGCTGCCCG GGGGCCGTCT CACTGCTTCG ATCAGCCGCA AGGGCGTCCA AGTCCTCTGA
|
|---|
| Protein sequence | MGVSTYTSDL VVVGLGYVGL PLAHEACRSG LKVTGLDVNQ RVVDGLNAGK SHIDDLSELD
IADMRAAGFT ATSDPSVLRN AQTIVICVPT PLSEEGSPDL SAVTSAAETI AAHLSPGTLV
ILESTTFPGT TDEVLRPILE RSGLVAGKDF HLAFSPERID PGNTLFGVAN TPKVVGGYTE
LCGEIAAAFY GKFVRTVVRA RGTREAEMAK LLENTYRHVN IALVNEMAIF CRELGVDLWD
AIACAATKPF GFQAFYPGPG VGGHCIPIDP NYLSYKVKTL GYPFRFVELA QEINSRMPDY
VLWRVQDMLN EAGLALSRST ILLLGVTYKA NIADQRESPS RAVAAKLMQK GATLLFHDPH
VPEWQVNGSP IPRADDLEQA LGEADLTVLL TDHSEYTPKM LLERCQRLLD TRGVLRRADS
ELPGGRLTAS ISRKGVQVL
|
|---|
| |