| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2492 |
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| Symbol | |
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| ID | 3580751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2935607 |
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| End bp | 2936287 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637686208 |
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| Product | SSU ribosomal protein S30P / sigma 54 modulation protein |
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| Protein accession | YP_290548 |
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| Protein GI | 72162891 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.316444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGACATCA TCGTCAAAGG TCGACGCACC GGAGTCAGCG ACAAGTTCCG GCGGCACGTC
GAGCACAAGC TGGCCAAGCT CCGCAAGTGG GAACGCAAGG ACATGATGAG CGTCGACGTG
GAGGTGTCCA AGGAGCGCAA CCCGAGGCTC GCCAACCACC GCGAGAGGGT GGAGCTGACC
ATCCGCTCCT CCGGCCCGGT GGTCCGAGGC GAGGCCGCCG CAGATGACCG CTACACCGCT
TTGGACCTCG CCCTGGACCG GGTCGAGGCC CGGCTGCGGA AGCTCGCTGA CCGCCGCAAG
GTGCACAAGG GAAGCCGAGG GCTCGTCTCC GTGGCCGCCG CGACCGCGCA GCTTCCTGTC
GACGGCCTTC CGGCCGACTC AGCCATCCCG CCGCAGGTGG TCGAGGACCG CGAGGAGAAC
CAGGCAGAGG AGTTCGACGG CAGCGCTGTC GACAGCGCTT TCGCCGACGA ATTCGTGGAG
TTGGACACCG AGGGCGGCGG TTCCCTGGTG GTCCGGGAGA AGTTCCACTA CGCCAAACCC
ATGACCATCG ACCAAGCCCT TCTGGAGATG GAGCTGGTGG GCCACGACTT CTACCTGTTC
CGCGACAAGG AGCAGGGGCT GCCCAGCGTG GTCTACCGGC GCAAGGGGTT CAACTATGGC
GTGCTGCGCC TCATGGAATA A
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| Protein sequence | MDIIVKGRRT GVSDKFRRHV EHKLAKLRKW ERKDMMSVDV EVSKERNPRL ANHRERVELT
IRSSGPVVRG EAAADDRYTA LDLALDRVEA RLRKLADRRK VHKGSRGLVS VAAATAQLPV
DGLPADSAIP PQVVEDREEN QAEEFDGSAV DSAFADEFVE LDTEGGGSLV VREKFHYAKP
MTIDQALLEM ELVGHDFYLF RDKEQGLPSV VYRRKGFNYG VLRLME
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