Gene Tfu_2489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_2489 
Symbol 
ID3580748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp2930901 
End bp2931350 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content65% 
IMG OID637686205 
Productputative phosphoenolpyruvate-dependent sugar phosphotransferase 
Protein accessionYP_290545 
Protein GI72162888 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2190] Phosphotransferase system IIA components 
TIGRFAM ID[TIGR00830] PTS system, glucose subfamily, IIA component 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.214502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTGCGG TACTCGCCCC CGTGACGGGT GTGGCTGTGG GACTCAGCAG AGTTCCTGAC 
CCGATGTTCG CCCAAGGGTT GGTGGGCCCG GGGACCGCGA TCGACCCCCG CAAGGAGGTG 
CAAGAGGCGG TTGCTCCGAT CACCGGCCGG ATCGTCAGTT TCCACCCGCA CGCGTTCGTA 
GTGCAGAGTG CGGACGGCAA GGGGGTCCTG GTACACCTGG GCATGAACAC GGTCCGGCTC 
CCCCTGATCC GAGGGTTTGA GCTCCTTGCC GCCCAGGGCG ACGAGGTCAC CGCGGGACAG 
CCGCTGATCA GGTGGAATCC GGCCGAGGTC GTAGCGAGTG GAATCTCCCC GATCGTGCCA 
ATCGTGGCTT TGGACGCGGA CGGCGACGTC ATTTCGCGTC CGGTGAGCGG AGAGGTCAAA 
CGAGGAGAAT TGCTATTCCG ATGGGCTTGA
 
Protein sequence
MLAVLAPVTG VAVGLSRVPD PMFAQGLVGP GTAIDPRKEV QEAVAPITGR IVSFHPHAFV 
VQSADGKGVL VHLGMNTVRL PLIRGFELLA AQGDEVTAGQ PLIRWNPAEV VASGISPIVP 
IVALDADGDV ISRPVSGEVK RGELLFRWA