| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2424 |
|---|
| Symbol | |
|---|
| ID | 3580263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 2845177 |
|---|
| End bp | 2846472 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637686139 |
|---|
| Product | homoserine dehydrogenase |
|---|
| Protein accession | YP_290480 |
|---|
| Protein GI | 72162823 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0460] Homoserine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.167017 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTGA AGGTGGCGCT GCTGGGTTGC GGCGTTGTGG GTTCTCAGGT GGTCCGGCTG
CTCAACGAGC AGTCGCGTGA ACTTGCGGAG CGCATCGGAA CGCCCCTGGA GATCGGAGGC
ATCGCGGTGC GCCGCCTGGA CCGCGCCCGG GGGACGGGCG TGGACCCCGA CCTCCTCACC
ACCGACGCCA TGGGTCTTGT GACCAGAGAC GACATCGACC TCGTGGTGGA GGTCATCGGC
GGCATCGAGC CCGCCCGGTC GCTCATCCTG GCCGCGATCC AGAAGGGCAA GTCTGTGGTG
ACCGCCAACA AGGCGCTGCT CGCCGAGGAC GGCGCGACCA TCCACGCCGC TGCCCGGGAA
GCGGGAGTTG ACGTGTACTA CGAGGCCAGC GTCGCCGGGG CCATCCCGCT GCTGCGGCCG
CTGCGTGACT CCCTGGCCGG GGACCGCGTC AACCGGGTCT TGGGCATCGT CAACGGCACC
ACCAACTACA TCCTGGACCG GATGGACAGC CTGGGCGCCG GCTTCACCGA GTCACTGGAG
GAAGCCCAGG CCCTGGGATA CGCCGAAGCC GACCCGACCG CCGACGTGGA GGGCTTCGAC
GCCGCCGCTA AAGCCGCGAT CCTGGCCCGG CTCGCCTTCC ACACACCGGT GACCGCTGCC
GATGTGCACC GCGAAGGCAT CACCGAGGTC TCCGCGGCCG ACATCGCCAG CGCCAAGGCC
ATGGGCTGCG TGGTGAAACT CCTCGCGATC TGCCAGCGCT CCGACGACGG CTCCAGCATC
GGCGTGCGCG TCCACCCGGT GATGCTGCCC CGCGAACACC CGCTCGCCAG CGTCAAAGGC
GCCTACAACG CGGTGTTCGT GGAAGCCGAG TCCGCCGGGC AGCTCATGTT CTACGGCGCG
GGCGCGGGAG GCGTCCCCAC CGCCAGCGCA GTCCTCGGCG ACCTGGTCGC GGTGGCACGG
AACCGCCTGG CCCGCACTTT CGTGGCCGAC GGCCGGGCCG ACGCGAAACT GCCCGTCCAC
CCCATGGGGG AGACCATCAC CAGCTACCAC GTGGCGCTGG ACGTTGCCGA CCGGCCCGGC
GTGCTCGCCG GGGTCGCCAA AGTCTTCGCG GCCAACGGCG TGTCGATCAA GCACGTCCGC
CAGGAAGGCC GCGGGGACGA CGCCCAGCTC GTCCTGGTCA GCCACACCGC GCCGGATGCC
GCCCTGGCCC GGACCGTGGA GCAACTGCGC AACCACGAGG ACGTCCGCGC GGTCGCCAGC
GTGATGCGGG TCGAAACCTT CGACAACGAA CGATGA
|
|---|
| Protein sequence | MALKVALLGC GVVGSQVVRL LNEQSRELAE RIGTPLEIGG IAVRRLDRAR GTGVDPDLLT
TDAMGLVTRD DIDLVVEVIG GIEPARSLIL AAIQKGKSVV TANKALLAED GATIHAAARE
AGVDVYYEAS VAGAIPLLRP LRDSLAGDRV NRVLGIVNGT TNYILDRMDS LGAGFTESLE
EAQALGYAEA DPTADVEGFD AAAKAAILAR LAFHTPVTAA DVHREGITEV SAADIASAKA
MGCVVKLLAI CQRSDDGSSI GVRVHPVMLP REHPLASVKG AYNAVFVEAE SAGQLMFYGA
GAGGVPTASA VLGDLVAVAR NRLARTFVAD GRADAKLPVH PMGETITSYH VALDVADRPG
VLAGVAKVFA ANGVSIKHVR QEGRGDDAQL VLVSHTAPDA ALARTVEQLR NHEDVRAVAS
VMRVETFDNE R
|
|---|
| |