| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2423 |
|---|
| Symbol | |
|---|
| ID | 3580262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 2843904 |
|---|
| End bp | 2844968 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637686138 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_290479 |
|---|
| Protein GI | 72162822 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGG CACGGGCGTG GCGAGGAATC GTCGAGGAAT ATCGCGATCG CCTTCCCGTC
ACGGCGAACA CCCCGGTCGT CACCCTGCTT GAGGGGGGTA CACCGCTGGT TCCCGCCACG
CGGGTTTCGG AACTGACCGG ATGCGAGGTC TACCTCAAGG TTGAAGGGCT CAATCCCACG
GGCTCCTTCA AAGACCGCGG GATGACCATG GCCATCTCCA AAGCCGCTGA GGAAGGAGCC
AAAGCGGTCA TCTGCGCGTC CACGGGGAAC ACCAGCGCCA GCGCCGCCGC CTACGCGGTA
CGCGCCGGGA TGACCTGCGC GGTCCTCGTG CCCCGGGGCA AGATCGCCAT GGGCAAACTG
GCGCAAGCCC TCGTCCACGG CGCCCGCCTG CTCCAAGTCG ACGGCAACTT CGACGACTGT
CTGGAACTGG CCCGCCAGCT CTCCACCGAC TACCCGGTGG CGCTGGTCAA CTCGGTCAAC
CCGTTCCGCC TCCAGGGCCA GAAGACCGCC TCGTTCGAGA TCGTGGACGC CCTCGGCGAC
GCTCCCGACG TCCACTGCCT GCCGGTGGGC AACGCGGGCA ACATCACCGC CTACTGGATG
GGCTACCAGG AGTACCACTC AGACGGACTG GCCACCCGCC TGCCGCGCAT GTTCGGCTTC
CAAGCCAGCG GGGCCTCACC GATCGTCGAT GGCGCACCGG TGACCCAGCC GCGTACTATT
GCTACTGCCA TCCGGATCGG CAACCCTGCT TCCTGGCGGT TTGCGGAAAA GGCCCGCGAC
GAGTCCGGCG GTCGCATCGA TGCGGTCACC GACCGGCAGA TTCTCGCCGC CTACCGGCTG
CTTGCCGGCC AGGAAGGGGT TTTCGTGGAA CTGGCCTCCG CGGCCAGTGT GGCGGGCCTA
CTGCAGGCAG TGGAAGCCGG GCAGATCGAG CGGGGCAGCC GCGTCGTCTG CACGGTCACC
GGCAACGGCC TCAAAGACCC CGACTGGGCT CTGGCCGGCG CCTCCTCTGC CACCACGATT
CCTGTCGATG CCCAGGCCGC TGCGGCGGCG CTCGGCCTGG CCTAG
|
|---|
| Protein sequence | MSMARAWRGI VEEYRDRLPV TANTPVVTLL EGGTPLVPAT RVSELTGCEV YLKVEGLNPT
GSFKDRGMTM AISKAAEEGA KAVICASTGN TSASAAAYAV RAGMTCAVLV PRGKIAMGKL
AQALVHGARL LQVDGNFDDC LELARQLSTD YPVALVNSVN PFRLQGQKTA SFEIVDALGD
APDVHCLPVG NAGNITAYWM GYQEYHSDGL ATRLPRMFGF QASGASPIVD GAPVTQPRTI
ATAIRIGNPA SWRFAEKARD ESGGRIDAVT DRQILAAYRL LAGQEGVFVE LASAASVAGL
LQAVEAGQIE RGSRVVCTVT GNGLKDPDWA LAGASSATTI PVDAQAAAAA LGLA
|
|---|
| |