Gene Tfu_2418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_2418 
Symbol 
ID3580257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2838089 
End bp2838946 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content69% 
IMG OID637686133 
Productmodification methylase HemK 
Protein accessionYP_290474 
Protein GI72162817 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCTCC TGCTCGACGA GGTCGCGCGG GCGACGCTTC GGCTCGCGGA AGCCGGGGTT 
GCCTCGCCCC GGGCGGACGC CGAGGAACTC GCGGCGTTCG TGCACGGCGT CCGTCGAGGA
GAGTTGCACA CGGTCGCGGA CAGCGACTTC GACGCCCGCT ACTGGGAGTG TGTAGCCCGC
AGGGCGGCAC GGGAACCCTT GCAGCACATC ACCGGCCGCG CCTACTTCCG CTATCTCGAG
TTGGAAGTAG GCCCCGGCGT TTTCATCCCC CGTCCCGAGA CCGAGATGAT GGTCTCCTGG
GCGATTGACA CCCTGCGGGC CATGGACGTC GCCGATCCCC TGGTCGTGGA CCTGGGCACC
GGGTCGGGCG CGATCGCGAT CTCCATCGCC CAAGAGGTGC CCCGCTCCCG AGTCCACGCG
GTGGAAGTGG ACGCGACAGC GCTGTCCTGG GCGAAACGCA ACATCGCCCG CAGCGGACTG
GGGGAGCGGA TCACCGCCCA CCACGCCGAT ATGCGCACCT GCCTGCCCGA ATACCACGGC
CGGGTGGACC TGGTCATCAC CAACCCCCCG TATGTGCCGC TGGACAGCGC CGACGAGATC
CCCCCGGAAG TCCGCGACTA CGATCCCGCC ATCGCGCTGT GGGCAGGCCC GGACGGGCTC
GACATGATCC GCCAGTTGGA AGCGGTCGGC CGCCGCCTGC TGCGCCCCGG CGGATACATC
GCTATCGAGC ACGGCGACGG ACAGGGCATC GACATCCCGC CGCTGTTCCC TGAAGAACTC
GGCTGGTGCG AGGTGCGCAA CCGGAAAGAC CTCGCCCACC GGGACCGGTT CGTGGTCGCT
CGCCGTGCCG TGGACTGA
 
Protein sequence
MNLLLDEVAR ATLRLAEAGV ASPRADAEEL AAFVHGVRRG ELHTVADSDF DARYWECVAR 
RAAREPLQHI TGRAYFRYLE LEVGPGVFIP RPETEMMVSW AIDTLRAMDV ADPLVVDLGT
GSGAIAISIA QEVPRSRVHA VEVDATALSW AKRNIARSGL GERITAHHAD MRTCLPEYHG
RVDLVITNPP YVPLDSADEI PPEVRDYDPA IALWAGPDGL DMIRQLEAVG RRLLRPGGYI
AIEHGDGQGI DIPPLFPEEL GWCEVRNRKD LAHRDRFVVA RRAVD