Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2399 |
Symbol | |
ID | 3580673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 2821183 |
End bp | 2822379 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637686114 |
Product | 3-hydroxyacyl-CoA dehydrogenase |
Protein accession | YP_290455 |
Protein GI | 72162798 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGAGG AAATCAACAA GGTTGGAGTG GTCGGGCTCG GCACGATGGG CGCCGGCATC GTCGAAGTGT TCGCCCGTGC GGGCTTCACC GTCACCGGGG TCGAAATCGA CGACGCCGCC CTGGAACGCG GCCGGACACA CCTGGAGAAA TCCCTGGCCA AAGCCGTCGC CAAAGGCAAA CTCACTGAAG ACGAGCAACG CGCCATCCTC GGACGCGTCA CATTCACCAC ATCCCGCGAC GACCTCGCCG ACGCGCACCT CGCTGTGGAG GCAGTCCCGG AGCGCCTCGA CATCAAACGC TCTGTCTTTG CAGACCTGGA CCGCATCCTG CCGCCCGCCG CGATCCTGGC GACCAACACG TCCTCGCTGT CCGTCACCGA AATCGCCGCA CTCACCAGCC GCCCAGGAAA AGTCATCGGG CTGCACTTCT TCAACCCTGC ACCGGTGATG CGGCTCGTCG AAATCGTCAC CACGGTCGTC ACCGAACCCC ACGTGCGCGA GACAGCGACC CAGGTCGTCA CCCGGCTGGG CAAGACCCCG GTAGCGGTCG GCGACCGGGC CGGGTTTGTG GCCAACGCGC TGCTCGTGCC GTACCTCAAC CACGCCGTCG CCGTCTATGA GCAGGGCCTG GCCACCCGGG AGCAGATCGA CGCCGCCATC ACCAGCGCGG CAGGATTCCC CATGGGGCCG CTCACCTTGA TGGATCTCGT CGGCCTGGAC GTGCTCCTCG ACGTCATGGA CGTCCTGTGG GACGAATTCC GCCGCCCCCG CTACGCGGCG GCCCCGCTGC TGCGCCGCAT GGTGGCCGCG GGCCTGCTCG GCCGCAAGAG CGGACGCGGA TTCTACGACT ACTCCGGCGC CGACAACCCC GCGGAACCGG AGCCGACCGC ACCGCTGGCC CAGCTCGTCG GTGACGGCCC AGGGCAGATC AGCCTCGCCG ACCTCCTGCT GGTCCCGCAC CTCAACGACG CGGCCCGCAT GATCGGCGAC GGGTACGCTA CCGCCGACGA CGTGGACACC GCGATGCGGC TGGGCTGCGG CTACCCCAAG GGTCTCGCCG CCATGCTCGA CGAACGCGGC GTGAAGAACG TCACCGAGAC CTTGGCGGAG CTGGCCGCGG CAGGACTCTT CACCGATGAC ACCGCTCCGC TGCTCACCAT GCTGGCCAAG CAAGGGAAGG ACACGCTCCG GTCCTGA
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Protein sequence | MVEEINKVGV VGLGTMGAGI VEVFARAGFT VTGVEIDDAA LERGRTHLEK SLAKAVAKGK LTEDEQRAIL GRVTFTTSRD DLADAHLAVE AVPERLDIKR SVFADLDRIL PPAAILATNT SSLSVTEIAA LTSRPGKVIG LHFFNPAPVM RLVEIVTTVV TEPHVRETAT QVVTRLGKTP VAVGDRAGFV ANALLVPYLN HAVAVYEQGL ATREQIDAAI TSAAGFPMGP LTLMDLVGLD VLLDVMDVLW DEFRRPRYAA APLLRRMVAA GLLGRKSGRG FYDYSGADNP AEPEPTAPLA QLVGDGPGQI SLADLLLVPH LNDAARMIGD GYATADDVDT AMRLGCGYPK GLAAMLDERG VKNVTETLAE LAAAGLFTDD TAPLLTMLAK QGKDTLRS
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